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Protein Overview: CE29053

General Information:
Name(s) found: CE29053 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00011814 General transcription factor IIH subunit 2 status:Confirmed UniProt:P34567 protein_id:CAA83139.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 376 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: DNA repair [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    RNA polymerase II transcription factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDEQKGYT WEAGYAEGLN INDVLVEDEG GSIEKSIAKY VADSKRKARL TKRPERIRLG  60
   61 IMRHVMIVID CSRFMTSKAM PPSRFVVVMK ALQTFLDRFF EQNPIAQIGL ITCKDRKADR 120
  121 LTMMTGNIRV LKESLNTLTE AFCGGDFSLQ NALQLACANL KGMPGHVSRE VVLVISALST 180
  181 IDPGNIYSTI ETMKRMNIRC SAIGLSAEMF VCKEMAKATK GEYSVALDPD HLQLLFSKHT 240
  241 LPPSSAKSSE CNAIHVGFPH HELITTRSFC VCHPDTKPIS SRGFICTQCG ARHCSIPAEC 300
  301 PVCKLTLVAA PQLARAFRHL QPLSAFEQIE VTRGFCYACE TRLSGEGFRC GSCQLVFCLD 360
  361 CDTLLHESLH VCPGCN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..288] PSI-BLAST 17.522879 No description for 2odpA was found.
    2 View Details [289..376] PSI-BLAST 11.0 Solution structure of the carboxy-terminal domain of human TFIIH P44 subunit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle