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Protein Overview: CE28979

General Information:
Name(s) found: CE28979 [WormBase]
Description(s) found:
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  • WBGene00021443 status:Partially_confirmed TR:Q965X1 protein_id:AAK93863.1 [WormBase]
  • gi|71993419|ref|NP_001022845.1| Y39A3CL.7a [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_497462.1| putative nuclear protein (3C923) [Caenorhabditis elegans] [NCBI NR]
  • gi|15277397|gb|AAK93863.1|AC024763_8 Hypothetical protein Y39A3CL.7a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28979 WBGene00021443 status:Partially_confirmed TR:Q965X1 protein_id:AAK93863.1 [wormpep150.fasta]
  • 28979 WBGene00021443 status:Predicted TR:Q965X1 protein_id:AAK93863.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein (3C923) [Caenorhabditis elegans]gi|15277397|gb|AAK93863.1| Hypothetical protein Y39A3CL.7a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE28979 WBGene00021443 status:Predicted TR:Q965X1 protein_id:AAK93863.1 [wormpep132.fasta]
  • 28979 WBGene00021443 status:Partially_confirmed TR:Q965X1 protein_id:AAK93863.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Partially_confirmed TR:Q965X1 protein_id:AAK93863.1 [wormpep115.fasta.reversed]
  • CE28979 status:Partially_confirmed TR:Q965X1 protein_id:AAK93863.1 [wormpep80.hongbin]
  • Hypothetical protein Y39A3CL.7a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y39A3CL.7a [Caenorhabditis elegans] [nr-271106-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 480 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMP]
    meiotic chromosome segregation [IMP]
    meiosis [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTENGESEDA GSVRKIKSLP GIGLPAGTDY PNLAEIPETP CKEVFWRKEV ADWFEIANNG  60
   61 YSFHRNRDLN AVFAKDLSGY WYRLNNQTKC FEFLFEGFKD TTDYTRISLP PQSPTFVGFN 120
  121 TLQQAVFPMN CDGKPILPKD DKGKTIFPFY DGYPLFPVDD SGAICVPLGD DEKPVFPRIP 180
  181 EEFGAYVPHF LDFLKEPRRA SPDVFDGRVV LPLNELGEPI YPRDELGNVL MPFIILDDGT 240
  241 RRRAVFCAED GTPILPFHNG EHALEVHEGE VLFQYEYQQK MMHLAQFSDK KTAQKPQELM 300
  301 DEQFYQQHYQ SYQQSTISTA NSTEIPSKIG QNSAKNPAKS TNLLLKQLTF MKKKQEAPSP 360
  361 SSSPLSAAIP AERPAKPNKE KERGDRFLPE PSRRFNRFNH RNRSPPSLSS RTSRHRSPER 420
  421 RRDRSRSRSL TYSPIDRKSR TNSDKYDKKR AKKSNRRDRS RFGDEKFEFF EYTAKKYSKI 480
  481

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] PSI-BLAST 11.69897 STRUCTURE OF BILE-SALT ACTIVATED LIPASE
    2 View Details [130..286] MSA 10.096993 View MSA. No confident structure predictions are available.
    3 View Details [287..480] MSA 28.076996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle