YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: tbc-12

General Information:
Name(s) found: tbc-12 / CE28759 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00044061 locus:tbc-12 status:Partially_confirmed UniProt:Q21928 protein_id:CCD71667.1 [WormBase]
  • gi|17569375|ref|NP_508458.1| TBC (Tre-2/Bub2/Cdc16) domain family member (tbc-12) [Caenorhabditis elegans] [NCBI NR]
  • gi|15055420|gb|AAA83513.2| Hypothetical protein R11B5.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28759 WBGene00020002 status:Partially_confirmed TR:Q21928 protein_id:AAA83513.2 [wormpep150.fasta]
  • 28759 WBGene00020002 status:Partially_confirmed TR:Q21928 protein_id:AAA83513.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • RabGAP/TBC domain containing protein (XD144) [Caenorhabditis elegans]gi|15055420|gb|AAA83513.2| Hypothetical protein R11B5.1 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q21928 protein_id:AAA83513.2 [wormpep115.fasta.reversed]
  • CE28759 status:Partially_confirmed TR:Q21928 protein_id:AAA83513.2 [wormpep80.hongbin]
  • CE28759 WBGene00044061 locus:tbc-12 status:Partially_confirmed UniProt:Q21928_CAEEL protein_id:AAA83513.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28759 WBGene00044061 locus:tag-236 status:Partially_confirmed UniProt:Q21928_CAEEL protein_id:AAA83513.2| [wormORF-contam.fasta]
  • CE28759 WBGene00044061 locus:tag-236 status:Partially_confirmed TR:Q21928 protein_id:AAA83513.2 [wormpep160-contam.fasta]
  • Hypothetical protein R11B5.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Temporarily Assigned Gene name family member (tag-236) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28759 WBGene00044061 locus:tbc-12 status:Partially_confirmed UniProt:Q21928 protein_id:AAA83513.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28759 WBGene00044061 locus:tbc-12 status:Partially_confirmed UniProt:Q21928 protein_id:CCD71667.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • TBC (Tre-2/Bub2/Cdc16) domain family OS=Caenorhabditis elegans GN=tbc-12 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 614 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of Rab GTPase activity [IEALink to PubMed article]
    Molecular Function: Rab GTPase activator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPCPYSPTV CLFSDRKLAG RSCSQSSSLA TVVENLPLSY NTDTKSLDRT PSLGCQGGAE  60
   61 SPSTAQETKF RRGHIRRSSY ESAQIQLNFA RRITTANGTP ALAPSAAKCL DEPLCSLSLN 120
  121 TRADCSSSSS EQDQYDSGIG CTESDSKRSS LDRRSELSDF DEPPSKPETL SKSRFFNFPK 180
  181 NFFSRNKEEK HGWKMFGSRN KQSGVMATTG LILEERPSGL PSKSADEAAH HKQMYLDILE 240
  241 QAKKKEQRAE KERLQAKAEQ KRLEEQTAAH CRVWVEQILP KWEEMKDSKR CRELWWQGVP 300
  301 AKVRGELWFL TIGNQIEITK ELYDGLMDQA EEKIAKQLAE QNKNSAERKE TSVTQIHLDA 360
  361 TRTFTSLGMF QKDGPYYDHL LKLLSAYAIL RPDIGYVQSM TFIAAVLLIQ MDPYPAFISF 420
  421 ANLLDRSLQS AFFGLKQPQM TEYFIAYDRY LEQELPALHQ HLDKLDVRPD LYLIEWTFAM 480
  481 YAKSLPLDVT CRIWDVYFRD GEEFLFKAAL GILRMYEPKL LTMDFDDCVE FLTKLPNTLT 540
  541 GAELFRNIEP FMRPYNGESS RSKKRFSQIF QEIDERVNPG GTTARTQITH NVQELKMSKS 600
  601 LSGFIKDLLS SPSH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] MSA 7.280997 View MSA. No confident structure predictions are available.
    2 View Details [186..237] deduced N/A No confident structure predictions are available.
    3 View Details [238..614] PSI-BLAST 73.0 No description for 2qq8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle