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Protein Overview: vps-26

General Information:
Name(s) found: vps-26 / CE28684 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00006931 locus:vps-26 Vacuolar protein sorting-associated protein 26 status:Partially_confirmed UniProt:O01258 protein_id:CAA92489.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 408 amino acids

    Gene Ontology:
    Cellular Component: retromer complex [IEALink to PubMed article]
    Biological Process: vacuolar transport [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQERSIAIPS ENFNLIFFLT HAQSRFSLIL LLKLRYSFVF QSKILIQTNR KTMAMLFGFG  60
   61 QSAEIQIRLS NEDTRKIVKA RGDDGNMHDH FLYYDGESVT GTVHVNLKKA NHKFEHQGIR 120
  121 IEFIGQIEVY YDRGNQQDFI SLTRELARPG DLTQNAQFPF EFNNVEKPFE TYMGTNVKLR 180
  181 YFLRVTVIRR LTDLTKELDL VVHALSSYPD NDKSIKMEVG IEDCLHIEFE YNKNKYHLQD 240
  241 VIVGKIYFLL VRIKIKYMEI AILKTEVVGS GPNTFKESET VAKFEIMDGA PVRGESIPIR 300
  301 LFLAGYDLAP SMRDVGKKFS VKYFLNLVLV DEEDRRYFKQ QEVTLWRKAD KVMRRPGTED 360
  361 DEEEKQTTSI PGTQKFTAPA PVEHPKPESP RSDPKSGSTS PDDNSDSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..408] PSI-BLAST 112.0 No description for 2fauA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle