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Protein Overview: CE28627

General Information:
Name(s) found: CE28627 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00019796 status:Predicted UniProt:O17117 protein_id:AAK77623.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 591 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNNYNEVQ DERPTTTQLP SLASVEFWHS GNREDWMHAL SAECQRLLQR SDETASTQQH  60
   61 QPRGSSELQA STTQLLDSSS QTEISMTENN ALEAEINELK QKVRMLTDDG QNKEKQTKEL 120
  121 EGVLNVATTS AMEAAQKLQV HQQKLKQEHK EAVETLVEAL RAEKEKLEKI LEDARKKDDE 180
  181 IEELKKKVNS ESSRATLADE AVQKLQTDKD KLEEEYMNDM RDLKKALKDN QEGLEKIAKD 240
  241 VKNKEGEIEE LKKSVSSEIV KATEAAHATD QLRKKLQKQQ DEHEKRVEQE HKKEIEDLKG 300
  301 ALAAEKRISE ADKVELKKLT EELQSMHLKN KELKNNVTTE NSRATGAVQE AQVLQEKLQQ 360
  361 ALKELEGKKK ELLEQENAHK LRMDQFEDDT KKRHKKEIKA LEVEVKKRNA TIKEHQVAAQ 420
  421 ERRAKHDAEV EELEQKLATE EEKCRRIVQD IREKLDAQFP PISRSPSTEC VWPEMIIDDV 480
  481 FWQQPSSSTS HVYSSFAFST PRSSSQNAPV QEEATSHQST SSEPASSAPN SNSSPNSSGM 540
  541 SPAVTSYLSN ISEPFTFSAR ITRRHAPPST SRASKRIAAK NAQEEPTKKP K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..335] PSI-BLAST 14.69897 Heavy meromyosin subfragment
    2 View Details [336..404] PSI-BLAST 3.69897 No description for 2iw5A was found.
    3 View Details [405..591] PSI-BLAST 6.39794 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle