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Protein Overview: cdo-1

General Information:
Name(s) found: cdo-1 / CE28465 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00018986 locus:cdo-1 Cysteine dioxygenase 1 status:Confirmed UniProt:Q20893 protein_id:CCD70867.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 190 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: L-cysteine metabolic process [IEALink to PubMed article]
    Molecular Function: cysteine dioxygenase activity [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISFVQLVVQ IREIFQQKLI DVDEVMKLMA SYKSNANEWR RFAIFDMNKY TRNLVDVGNG  60
   61 KYNLMILCWG PGMASSVHDH TDAHCFVKIL DGELTETKYA WPRKRHVPLD ISENKTYGMN 120
  121 GVSYMNDELG LHRMENLSHS NGAVSLHLYI PPYSTCNAFD ERTGKKTQCT VTFYSKYGKK 180
  181 VDYRGSKNGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] PSI-BLAST 65.0 No description for 2ic1A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  1.79942166158385 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
    		•  1.78958805205885 bayes_pls_golite062009
  • dioxygenase activity
    		•  0.855730327285165 bayes_pls_golite062009
  • binding
    		•  0.469306358852266 bayes_pls_golite062009
  • catalytic activity
    		•  0.401988496917198 bayes_pls_golite062009
  • protein binding
    		•  0.133891883527478 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle