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Protein Overview: csn-6

General Information:
Name(s) found: csn-6 / CE28377 [WormBase]
Description(s) found:
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  • WBGene00000818 locus:csn-6 COP9 signalosome complex subunit 6 status:Confirmed UniProt:Q95PZ0 protein_id:CAC44307.1 [WormBase]
  • gi|55976567|sp|Q95PZ0.1|CSN6_CAEEL RecName: Full=COP9 signalosome complex subunit 6; Short=Signalosome subunit 6 [NCBI NR]
  • gi|17543986|ref|NP_502557.1| COP-9 SigNalosome subunit family member (csn-6) [Caenorhabditis elegans] [NCBI NR]
  • gi|14787740|emb|CAC44307.1| C. elegans protein Y67H2A.6a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • COP9 signalosome complex subunit 6 OS=Caenorhabditis elegans GN=csn-6 PE=1 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE28377 WBGene00000818 locus:csn-6 status:Confirmed SW:Q95PZ0 protein_id:CAC44307.1 [wormpep150.fasta]
  • 28377 WBGene00000818 locus:csn-6 status:Confirmed TR:Q95PZ0 protein_id:CAC44307.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • constitutive photomorphogenic COP9 SigNalosome subunit (47.5 kD) (csn-6) [Caenorhabditis elegans]gi|14787740|emb|CAC44307.1| Hypothetical protein Y67H2A.6 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE28377 WBGene00000818 locus:csn-6 status:Confirmed TR:Q95PZ0 protein_id:CAC44307.1 [wormpep132.fasta]
  • 28377 WBGene00000818 locus:csn-6 status:Confirmed SW:Q95PZ0 protein_id:CAC44307.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • locus:csn-6 status:Confirmed TR:Q95PZ0 protein_id:CAC44307.1 [wormpep115.fasta.reversed]
  • CE28377 status:Confirmed TR:Q95PZ0 protein_id:CAC44307.1 [wormpep80.hongbin]
  • CE28377 WBGene00000818 locus:csn-6 status:Confirmed UniProt:Q95PZ0 protein_id:CAC44307.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28377 WBGene00000818 locus:csn-6 status:Confirmed UniProt:Q95PZ0 protein_id:CAC44307.1| [wormORF-contam.fasta]
  • COP9 signalosome complex subunit 6 (Signalosome subunit 6) [nr-271106-contam.fasta]
  • COP-9 SigNalosome subunit family member (csn-6) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y67H2A.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28377 WBGene00000818 locus:csn-6 status:Confirmed UniProt:Q95PZ0 protein_id:CAC44307.1 COP9 signalosome complex subunit 6 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 426 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    establishment of mitotic spindle orientation [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNAPSGSC SSKVLLHPLV IMQMSEHYSR TKVQQGPTVK KVFGAILGRQ NGRQVEAINS  60
   61 FVLKMETEEM AEPVTFSTEH LLQRADQYLE VFPELQVIGL YCAGEDDNLT PEEKPLLSKL 120
  121 TNAVRNSEKA GQIDATLFLK LNSITAGTTR KLPLFAFEAD VTDQEKHKPI EWILVSEESE 180
  181 RVGVNHIAKL STKHGKDGKS VGKKHAEAQD AAMSMLQNRV DLIVAYLEKV QDGTLQPNFE 240
  241 ILKEANLLAQ KLKTIDRYAA EFTDSFEKEE KTMTVFSLMP RLTTLLGNMQ NVWNKLSAQR 300
  301 ADLLADDGFH GKSTSRWAHP VRFKSQHLGR PQQADDDDYF DDEDLENDMS GPRRKIHAAD 360
  361 SPAGSRRRRV PPRAMNFLGR NSGMQAATDE MELSGQEENM GSNYIPDVPR PSATAHNESD 420
  421 ESSQAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] PSI-BLAST 43.39794 No description for 2o95A was found.
    2 View Details [198..310] MSA 2.161995 View MSA. No confident structure predictions are available.
    3 View Details [311..426] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle