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Protein Overview: CE28307

General Information:
Name(s) found: CE28307 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00018187 status:Confirmed UniProt:Q20173 protein_id:CCD70822.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 333 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: growth factor activity [IEALink to PubMed article]
    actin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACQTGIRAN AALRNALNLG KQAKLRLIKI VVNNEEMTPN YEFAGTANWR DDWRACLPDC  60
   61 VDAYEPCFIL FRLNTITEWV LITFVDDRAP VREKMLLAAT CATFKSEFGQ CYIEHEKHVT 120
  121 DLKDLTLNAF EAWLKAKTEL GPMSEVEREL HNAQQERAAI AHAGPQHMKG VAFPVDRNAE 180
  181 EALRQLASQK LSFVQLSVDT LNEAIKLEGT LESLEPSQLA SKVPRDKPRY TFYNFDHTWE 240
  241 GVPQQCTLFI YSLPSSGSSI KERMLYSSCK GPFLSAAQNQ YGVVITNKME VDARDDLSEK 300
  301 ALLEVIHPLP VEAPKQFSRP APPRAGPRRI TKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] PSI-BLAST 41.39794 Adf-H domain of twinfilin isoform-1
    2 View Details [140..333] PSI-BLAST 39.221849 No description for 2d8bA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  7.52071741004022 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  6.04859625643932 bayes_pls_golite062009
  • actin filament binding
    		•  5.45532510538573 bayes_pls_golite062009
  • binding
    		•  2.41877859618486 bayes_pls_golite062009
  • protein kinase activity
    		•  2.22634235673758 bayes_pls_golite062009
  • protein binding
    		•  1.87981807141519 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  1.87091423399482 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.67227267699496 bayes_pls_golite062009
  • kinase activity
    		•  1.55883505515498 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.30213296029859 bayes_pls_golite062009
  • signal transducer activity
    		•  1.14209355225632 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.14209355225632 bayes_pls_golite062009
  • transferase activity
    		•  0.591259446255369 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.482954032096802 bayes_pls_golite062009
  • structural molecule activity
    		•  0.391701411061931 bayes_pls_golite062009
  • actin monomer binding
    		•  0.224304003054399 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle