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Protein Overview: ztf-3

General Information:
Name(s) found: ztf-3 / CE28215 [WormBase]
Description(s) found:
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  • WBGene00016905 locus:ztf-3 status:Confirmed UniProt:V6CLP3 protein_id:CDK13477.1 [WormBase]
  • gi|17506187|ref|NP_490711.1| Zinc finger Transcription Factor family member (ztf-3) [Caenorhabditis elegans] [NCBI NR]
  • gi|14573981|gb|AAF39786.2| Hypothetical protein C53D5.4 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28215 WBGene00016905 locus:ztf-3 zinc finger protein status:Confirmed TR:Q9N5V6 protein_id:AAF39786.2 [wormpep150.fasta]
  • 28215 WBGene00016905 zinc finger protein status:Confirmed TR:Q9N5V6 protein_id:AAF39786.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • zinc finger protein 24 (1A760) [Caenorhabditis elegans]gi|14573981|gb|AAF39786.2| Hypothetical protein C53D5.4 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE28215 WBGene00016905 zinc finger protein status:Confirmed TR:Q9N5V6 protein_id:AAF39786.2 [wormpep132.fasta]
  • 28215 WBGene00016905 locus:ztf-3 zinc finger protein status:Confirmed TR:Q9N5V6 protein_id:AAF39786.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • zinc finger protein status:Confirmed TR:Q9N5V6 protein_id:AAF39786.2 [wormpep115.fasta.reversed]
  • CE28215 zinc finger protein status:Partially_confirmed TR:Q9N5V6 protein_id:AAF39786.2 [wormpep80.hongbin]
  • CE28215 WBGene00016905 locus:ztf-3 zinc finger protein status:Confirmed UniProt:Q9N5V6_CAEEL protein_id:AAF39786.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28215 WBGene00016905 locus:ztf-3 zinc finger protein status:Confirmed UniProt:Q9N5V6_CAEEL protein_id:AAF39786.2| [wormORF-contam.fasta]
  • Hypothetical protein C53D5.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Zinc finger Transcription Factor family member (ztf-3) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28215 WBGene00016905 locus:ztf-3 zinc finger protein status:Confirmed UniProt:Q9N5V6 protein_id:AAF39786.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28215 WBGene00016905 locus:ztf-3 status:Confirmed UniProt:V6CLP3 protein_id:CDK13477.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q9N5V6, Zinc finger putative Transcription Factor family OS=Caenorhabditis elegans GN=ztf-3 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 301 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: collagen and cuticulin-based cuticle attachment to epithelium [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEFIGNEEF QNFMKATGFI QEFTRRLLER SSKNIIKIPD NLSNVNQLTC LVKQFLREQQ  60
   61 DLAVKVEKVQ ENQKNLSDFV KEKLTNCNCH VQLDVRNLLA KEMKLQDLRQ DDGLDFSIKL 120
  121 PSTSSTDFTV SLNQVVDADA QQRFDLELLK MFGAGNIPHF QPPPDLYQHH HIPHTSQQVA 180
  181 QENLAMLANV PKLDDNNAYF DTFSPEKSGK RAKKRAAPSS AHEAQPNNGP YKCRDCEKTF 240
  241 RQKHGLNQHL LTHETNGAFE CDGCGKRYSR QESVYRHQRS TPCTKYQNLT TVEHDDTGAL 300
  301 F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] MSA 1.249996 View MSA. No confident structure predictions are available.
    2 View Details [117..301] PSI-BLAST 56.09691 No description for 2i13A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle