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Protein Overview: glr-8

General Information:
Name(s) found: glr-8 / CE27990 [WormBase]
Description(s) found:
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  • WBGene00001619 locus:glr-8 status:Partially_confirmed UniProt:Q19693 protein_id:CCD64577.1 [WormBase]
  • gi|17567257|ref|NP_509097.1| GLutamate Receptor family (AMPA) family member (glr-8) [Caenorhabditis elegans] [NCBI NR]
  • gi|14574116|gb|AAA83192.2| Glutamate receptor family (ampa) protein 8 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27990 WBGene00001619 locus:glr-8 glutamate receptor status:Partially_confirmed TR:Q19693 protein_id:AAA83192.2 [wormpep150.fasta]
  • 27990 WBGene00001619 locus:glr-8 glutamate receptor status:Partially_confirmed TR:Q19693 protein_id:AAA83192.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • AMPA GLutamate Receptor subunit (glr-8) [Caenorhabditis elegans]gi|14574116|gb|AAA83192.2| Glutamate receptor family (ampa) protein 8 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:glr-8 glutamate receptor status:Partially_confirmed TR:Q19693 protein_id:AAA83192.2 [wormpep115.fasta.reversed]
  • CE27990 glutamate receptor status:Partially_confirmed TR:Q19693 protein_id:AAA83192.2 [wormpep80.hongbin]
  • CE27990 WBGene00001619 locus:glr-8 glutamate receptor status:Partially_confirmed UniProt:Q19693_CAEEL protein_id:AAA83192.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27990 WBGene00001619 locus:glr-8 glutamate receptor status:Partially_confirmed UniProt:Q19693_CAEEL protein_id:AAA83192.2| [wormORF-contam.fasta]
  • GLutamate Receptor family (AMPA) family member (glr-8) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Glutamate receptor family (ampa) protein 8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE27990 WBGene00001619 locus:glr-8 glutamate receptor status:Partially_confirmed UniProt:Q19693 protein_id:AAA83192.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27990 WBGene00001619 locus:glr-8 glutamate receptor status:Partially_confirmed UniProt:Q19693 protein_id:CCD64577.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE27990 WBGene00001619 locus:glr-8 status:Partially_confirmed UniProt:Q19693 protein_id:CCD64577.1 [wormpep246-ecoli-contam.fasta]
  • GLutamate Receptor family (AMPA) OS=Caenorhabditis elegans GN=glr-8 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 489 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    Molecular Function: ionotropic glutamate receptor activity [IEALink to PubMed article]
    extracellular-glutamate-gated ion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGRTLKMVV PAIEPPYVNY VNFSDAAVTD KGYGPGVVME ILKEIGKRLN LTYEILPALG  60
   61 STWGEYLNGS WTGAFGQLVR GEVDLLAGGA IMEYDRSVIA DLTYPFQFEP TGIMIRSPEK 120
  121 YEDDTLLIVT EPFSWEVWVI TAAVILISGV IFLVMTNIIR KVYEEMTVTP FESIWVFFSI 180
  181 FVQQGLPEQP RSWSCRVLVA LWWLASITLS ATFTGSLVAL FAVDKTNVPF QNIDQLVRLV 240
  241 KQGKFEIVMD ENSFTRTEMI ARSKLPVYRD LWHEMIVNHK VKYVNGIARG VAFVRANPGY 300
  301 ALLGPMATLN FYAYSDCKVI LFNDGILPVY LSIPLVKNSI YSPYFSTKIR EMVERGFTQK 360
  361 WIADYRSYVA MQKINECNST TIGPKSYLDL KRAQGAFWVF LGGAGLGLAL FVGEFIFKFF 420
  421 REKMTKHTKT TTVPPEVATV SANVAENSTS LDIPDEVLPS APLPSEDGNW SLRRRNILNL 480
  481 SLDLSNIAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] PSI-BLAST 20.154902 No description for 2v3tA was found.
    2 View Details [173..373] PSI-BLAST 25.30103 No description for 2i0bA was found.
    3 View Details [374..489] MSA 2.379992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle