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Protein Overview: lin-26

General Information:
Name(s) found: lin-26 / CE27972 [WormBase]
Description(s) found:
Found 24 descriptions.
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  • WBGene00003012 locus:lin-26 Transcription factor lin-26 status:Confirmed UniProt:Q27355 protein_id:CCD62034.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: regulation of cell fate specification [IMPLink to PubMed article]
    vulval development [IMPLink to PubMed article]
    gonad development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    establishment or maintenance of epithelial cell apical/basal polarity [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    epidermis development [IMPLink to PubMed article]
    ectoderm development [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: transcription factor activity [ISSLink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSKFVVVEV SNSNNTMTLV EYLVTHGFDK FAVVTDLVDH PSFKYKDGSS SPESPSTTAS  60
   61 TAAQHTPPRT AVSTPTSINT PVPPHQNKQR HSIDKIAANL STKKVSPSSI EKQLQRTSHN 120
  121 PLHQLSTPHA LSQLQKLLEE QHKINQMNIQ KKEQERQQAE IQRILLQQAN AAQINHSFGL 180
  181 ERLTPEYDDN HHSETISKAS SEDLKTEPDS TDFGLGTSDD QVRASMLHLL HPVFAPAFGM 240
  241 LDAENIFGAA SKPTTPASKR RNTDSNGAPS KKHRWLPVNE LEESRSSRGK NCGRVHCKAT 300
  301 YKCALCGKPT TLNSTGSRWN LLRHVIMIHS DCKPYKCWDC DFTGIKSNVI SHARQCRHNA 360
  361 EDAHDITTDE MRAEWNLRLH ECFPDYVRAK ERGWQPEEVT VKKEEVEESP TLVKQELTLV 420
  421 KQEPTFAEQL EPMAQPLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] deduced N/A No confident structure predictions are available.
    2 View Details [213..438] PSI-BLAST 47.39794 No description for 2i13A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle