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Protein Overview: dim-1

General Information:
Name(s) found: dim-1 / CE27706 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00001000 locus:dim-1 Disorganized muscle protein 1 status:Confirmed UniProt:Q18066 protein_id:CCD65066.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 640 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLAPFFKI SDSILADESF DDLEINNHFK CTSKDLNEYP RTSTPLPGEI TSIYSLPRSY  60
   61 NNQNLCTRSK PTTFISQNQQ KGMTEKPKHS EYFLRLMKTR QEMQKKLTAK NGSNKSVQQY 120
  121 LRKLPPSTSK EVTIIPVKMK PDDNSVYISK ELSDRTDTKL PKVSTKEVEK FGEQSDDEER 180
  181 HERSHIASDF NQKTPQSTHA TSNHRKRIFI GRTGAKQQHV SKKATESELP YNIDVSTSNT 240
  241 TNATEALKLL KRPLLLPSKD PRSSKMPRLD LNQHQFRCKQ YIVHSQFTCT QIEKTFKCRV 300
  301 GTSTESEDLD DYYFDAMPDG KAPHFPQQPV ARQNDDGSLE LECFVDANPT PQVKWYYDNK 360
  361 EVENSGRFSA NLANKGSDSY SAILTIKELA DADAGAYRCA IVNPHGKGNA NFNLKLTGFS 420
  421 SPTFVEKPQI SSRDDGQVMV MEFRAKSILE PTFVWQKLVG GGAEEIIANS DRIKAVKKLE 480
  481 AGNVYYSALE IKEPTKDKDA GQFICTVKNE SGKLTATFTV KFEVPEGAPS FTRKPQILQQ 540
  541 TSAGGEPAIC FDIGYSARMN PQVTWISPKS KKMKESSRIK FKTNDEGNGN FTAQLELTNY 600
  601 KAKDSGTYTC NIKNDAGEAN VELTLNIEGP LDDYADDSEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..640] PSI-BLAST 53.69897 Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle