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Protein Overview: dsl-3

General Information:
Name(s) found: dsl-3 / CE27622 [WormBase]
Description(s) found:
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  • WBGene00001105 locus:dsl-3 Delta-like protein status:Confirmed UniProt:Q95Y10 protein_id:CCD66710.1 [WormBase]
  • gi|17543296|ref|NP_500108.1| Delta/Serrate/Lag-2 domain family member (dsl-3) [Caenorhabditis elegans] [NCBI NR]
  • gi|14574320|gb|AAK68460.1|AC024776_2 Delta/serrate/lag-2 domain protein 3, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27622 WBGene00001105 locus:dsl-3 status:Confirmed TR:Q95Y10 protein_id:AAK68460.1 [wormpep150.fasta]
  • 27622 WBGene00001105 locus:dsl-3 status:Partially_confirmed TR:Q95Y10 protein_id:AAK68460.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • delta-like 1 precursor family member (29.5 kD) (4C377) [Caenorhabditis elegans]gi|14574320|gb|AAK68460.1| Delta/serrate/lag-2 domain protein 3 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • 27622 WBGene00001105 locus:dsl-3 status:Confirmed TR:Q95Y10 protein_id:AAK68460.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • locus:dsl-3 status:Partially_confirmed TR:Q95Y10 protein_id:AAK68460.1 [wormpep115.fasta.reversed]
  • CE27622 status:Partially_confirmed TR:Q95Y10 protein_id:AAK68460.1 [wormpep80.hongbin]
  • CE27622 WBGene00001105 locus:dsl-3 status:Confirmed UniProt:Q95Y10_CAEEL protein_id:AAK68460.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27622 WBGene00001105 locus:dsl-3 status:Confirmed UniProt:Q95Y10_CAEEL protein_id:AAK68460.1| [wormORF-contam.fasta]
  • Delta/Serrate/Lag-2 domain family member (dsl-3) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Delta/serrate/lag-2 domain protein 3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE27622 WBGene00001105 locus:dsl-3 status:Confirmed UniProt:Q95Y10 protein_id:AAK68460.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27622 WBGene00001105 locus:dsl-3 status:Confirmed UniProt:Q95Y10 protein_id:CCD66710.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE27622 WBGene00001105 locus:dsl-3 status:Confirmed UniProt:Q95Y10 protein_id:CCD66710.1 Delta-like protein [wormpep246-ecoli-contam.fasta]
  • Delta-like protein OS=Caenorhabditis elegans GN=dsl-3 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 263 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: cell communication [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKVIFALFL AFQQITCSGY LELYFQSEFH LKATVNITSC STTAPPTLIP LMISSNETVK  60
   61 MHKVPMKMDG SEYQITIFVI NQDRLDIDNA TITTSFVPKN GQISPLTVMF PFTGIRMRVG 120
  121 CDEQWHGEKC DVFCCSETAS RVGKVCNSHG QLGCPQGKRG LDCALPISKK WCKCQNNGAC 180
  181 ISSFGKNLHE KMQCECQLGF RGSHCEERVD NIEMKSTYGV DPKKFEIATA KMLYESVVDN 240
  241 ELVEVKRERT GGHFLQNLRI NDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263] PSI-BLAST 10.522879 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.44119144078508 bayes_pls_golite062009
  • receptor binding
    		•  1.40618339011373 bayes_pls_golite062009
  • protein binding
    		•  1.15716342217655 bayes_pls_golite062009
  • growth factor activity
    		•  0.25853515067422 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle