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Protein Overview: cutl-23

General Information:
Name(s) found: cutl-23 / CE27402 [WormBase]
Description(s) found:
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  • WBGene00021343 locus:cutl-23 status:Partially_confirmed UniProt:Q9BKQ4 protein_id:CCD61512.1 [WormBase]
  • gi|17555634|ref|NP_498247.1| CUTiclin-Like family member (cutl-23) [Caenorhabditis elegans] [NCBI NR]
  • gi|13592472|gb|AAK31565.1| Hypothetical protein Y37B11A.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27402 WBGene00021343 status:Partially_confirmed TR:Q9BKQ4 protein_id:AAK31565.1 [wormpep150.fasta]
  • 27402 WBGene00021343 status:Predicted TR:Q9BKQ4 protein_id:AAK31565.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, alpha 3 type VI collagen ; alpha-3 polypeptide precursor family member (3G863) [Caenorhabditis elegans]gi|13592472|gb|AAK31565.1| Hypothetical protein Y37B11A.1 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • 27402 WBGene00021343 status:Partially_confirmed TR:Q9BKQ4 protein_id:AAK31565.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Predicted TR:Q9BKQ4 protein_id:AAK31565.1 [wormpep115.fasta.reversed]
  • CE27402 status:Predicted TR:Q9BKQ4 protein_id:AAK31565.1 [wormpep80.hongbin]
  • CE27402 WBGene00021343 locus:cutl-23 status:Partially_confirmed UniProt:Q9BKQ4_CAEEL protein_id:AAK31565.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27402 WBGene00021343 status:Partially_confirmed UniProt:Q9BKQ4_CAEEL protein_id:AAK31565.1| [wormORF-contam.fasta]
  • Y37B11A.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y37B11A.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE27402 WBGene00021343 locus:cutl-23 status:Partially_confirmed UniProt:Q9BKQ4 protein_id:AAK31565.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27402 WBGene00021343 locus:cutl-23 status:Partially_confirmed UniProt:Q9BKQ4 protein_id:CCD61512.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CUTiclin-Like OS=Caenorhabditis elegans GN=cutl-23 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 789 amino acids

    Gene Ontology:
    Cellular Component: proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: extracellular matrix organization [IEALink to PubMed article]
    Molecular Function: collagen binding [IEALink to PubMed article]
    extracellular matrix structural constituent [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLVALPLL ILAVTFLRDT KAVKIIDNGL APPEIVHTPV STKPRCKVFA PPLDLVFILD  60
   61 SSGSLRDKFQ DEIDIIRRIL KHVTIGKTAT RVMLIQFSGT QHLEFNFEKF TDREELLAAL 120
  121 DVLRHVSGIT RIGGAFEFAL QQLKTPGSGL RDGTVPKIVY LLSDGRTHDF PKDWQMADIL 180
  181 RREIPNIDIW AYGTGDYVAM AALANYTQSE QKIVTNLNLQ KLEPQFEKYH GTEICEQQPS 240
  241 CVKGSDKPLD LALVVDASES LDHLFSDQKK FLVERVLGNI NIHPEAVRVA LITYSGQAFV 300
  301 HFKFNSFLYG NNTSVQGFVK NIRSIKGTTA TNVALMDAFD LLTSKDPSIG VREGVPKMAL 360
  361 VLTDGHSHKS PKDISEKMRA AGIIMIAVSV TPRPLVDEAE LRLIAGSEKR AFTPPNLHDF 420
  421 ESEFMKYVGF GCDGIELPPD AKPQVRGATD VKCTEHSMSI VVRTQRALQG VMYAHMYHDE 480
  481 PECMIRKTDN SREIQMTFTE GKCGLVKTPT ADGHGYHFNI TVILQFHPLI ITRADQGLDM 540
  541 SCFVSSAVPR QELDRAVLKN AADTQCVYRL HRYSPGQCVA LDAKVGETLY HRWACDSPPE 600
  601 YNYLVHDCFV QSEKHTQQIL DSNGCEVDQH FLETPNYSRF KDYPEDSYVF QEMSVFKFPG 660
  661 DGDLLFHCKI SLCNMNDPNA PCNQSIPPKC PKKVPVLPVR QKRSVSAEEM ASPEWRSKQI 720
  721 RKRQTELKNR SRRQIVETKA GYYMTLQVET RLAQIILQFL TIFKSFRTLN VLLSESIRPR 780
  781 DSVKYCDIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] PSI-BLAST 41.0 The mouse von Willebrand Factor A1-botrocetin complex
    2 View Details [243..527] PSI-BLAST 21.09691 No description for 2ok5A was found.
    3 View Details [528..677] Pfam 5.657577 No description for PF00100.14 was found. No confident structure predictions are available.
    4 View Details [678..789] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0650247416983729 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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