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Protein Overview: CE27333

General Information:
Name(s) found: CE27333 [WormBase]
Description(s) found:
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  • WBGene00022207 locus:elk-2 status:Partially_confirmed UniProt:Q95XF0 protein_id:CCD74429.1 [WormBase]
  • gi|17570479|ref|NP_508072.1| hypothetical protein Y73B3A.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|13775554|gb|AAK39362.1| Hypothetical protein Y73B3A.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27333 WBGene00022207 status:Predicted TR:Q95XF0 protein_id:AAK39362.1 [wormpep150.fasta]
  • 27333 WBGene00022207 status:Predicted TR:Q95XF0 protein_id:AAK39362.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, putative nuclear protein (XA744) [Caenorhabditis elegans]gi|13775554|gb|AAK39362.1| Hypothetical protein Y73B3A.5 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q95XF0 protein_id:AAK39362.1 [wormpep115.fasta.reversed]
  • CE27333 status:Partially_confirmed TR:Q95XF0 protein_id:AAK39362.1 [wormpep80.hongbin]
  • CE27333 WBGene00022207 status:Predicted UniProt:Q95XF0_CAEEL protein_id:AAK39362.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27333 WBGene00022207 status:Predicted UniProt:Q95XF0_CAEEL protein_id:AAK39362.1| [wormORF-contam.fasta]
  • Y73B3A.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y73B3A.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27333 WBGene00022207 status:Predicted UniProt:Q95XF0 protein_id:AAK39362.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE27333 WBGene00022207 locus:elk-2 status:Partially_confirmed UniProt:Q95XF0 protein_id:CCD74429.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • ELK transcription factor homolog OS=Caenorhabditis elegans GN=elk-2 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of vulval development [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNQKEFPSF NDLLHFEKNI FRISKNVQLQ NLLTKLNIFQ VIGKKFVYRF VTTDAHTPPT  60
   61 ADFSSNMNMK MCYVKDEKDI RHEIPSFMTS LQAPPPPPPP QNPRGNTDFS ALSLLGTDSP 120
  121 TTHSVSTPSP TDSVCSPSSS VASSATPSTS SPVDESRQCR KRSLSSSTTP STTAPPQPPT 180
  181 KKGMKPNPLN LTATSNFSLQ PSISSPLLML QQHHQNSPLF QAQISQLYTY AALASAGLYG 240
  241 PQISPHLASQ SPFRSPLVTP KNLGLGELGS SGRTPGLGES QVFQFPPVSA FQATNPLLNT 300
  301 FSNSDKRLVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] FFAS03 1.05 Crystal structure of hypothetical protein (tm1012) from Thermotoga maritima at 1.60 A resolution
    2 View Details [81..310] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle