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Protein Overview: cdf-1

General Information:
Name(s) found: cdf-1 / CE27065 [WormBase]
Description(s) found:
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  • WBGene00000393 locus:cdf-1 Cation diffusion facilitator family protein 1 status:Confirmed UniProt:Q95QW4 protein_id:CCD64570.1 [WormBase]
  • gi|17550442|ref|NP_509095.1| Cation Diffusion Facilitator family member (cdf-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|13775344|gb|AAK39165.1| Cation diffusion facilitator family protein 1, isoform a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27065 WBGene00000393 locus:cdf-1 Cobalt uptake protein (S. cerevisiae) status:Partially_confirmed TR:Q18009 protein_id:AAK39165.1 [wormpep150.fasta]
  • 27065 WBGene00000393 locus:cdf-1 Cobalt uptake protein (S. cerevisiae) status:Partially_confirmed TR:Q18009 protein_id:AAK39165.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cation Diffusion Facilitator family member (cdf-1) [Caenorhabditis elegans]gi|13775344|gb|AAK39165.1| Cation diffusion facilitator family protein 1, isoform a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:cdf-1 Cobalt uptake protein (S. cerevisiae) status:Partially_confirmed TR:Q18009 protein_id:AAK39165.1 [wormpep115.fasta.reversed]
  • CE27065 locus:cdf-1 Cobalt uptake protein (S. cerevisiae) status:Partially_confirmed [wormpep80.hongbin]
  • CE27065 WBGene00000393 locus:cdf-1 Cobalt uptake protein (S. cerevisiae) status:Partially_confirmed UniProt:Q95QW4 protein_id:AAK39165.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27065 WBGene00000393 locus:cdf-1 Cobalt uptake protein (S. cerevisiae) status:Partially_confirmed UniProt:Q95QW4 protein_id:AAK39165.1| [wormORF-contam.fasta]
  • Cation Diffusion Facilitator family member (cdf-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Cation diffusion facilitator family protein 1, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE27065 WBGene00000393 locus:cdf-1 Cobalt uptake protein (S. cerevisiae) status:Partially_confirmed SW:Q95QW4 protein_id:AAK39165.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE27065 WBGene00000393 locus:cdf-1 Cobalt uptake protein (S. cerevisiae) status:Confirmed UniProt:Q95QW4 protein_id:AAK39165.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27065 WBGene00000393 locus:cdf-1 Cobalt uptake protein (S. cerevisiae) status:Confirmed UniProt:Q95QW4 protein_id:CCD64570.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE27065 WBGene00000393 locus:cdf-1 status:Confirmed UniProt:Q95QW4 protein_id:CCD64570.1 Cation diffusion facilitator family protein 1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q95QW4, Isoform a of Cation diffusion facilitator family protein 1 OS=Caenorhabditis elegans GN=cdf-1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 519 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    Biological Process: positive regulation of vulval development [IMPLink to PubMed article]
    cation transport [IEALink to PubMed article]
    zinc ion transport [ISSLink to PubMed article]
    positive regulation of Ras protein signal transduction [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: zinc ion transmembrane transporter activity [ISSLink to PubMed article]
    cation transmembrane transporter activity [IEALink to PubMed article]
    binding [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVTMEDRSV KADKADRDDN NTTSTELLGK MRQTKVIDNC SHGTHTLEHD LRLKGEPIGK  60
   61 SESVKGVSRS LIIQIGMTVI FCALEFITGV VCSSIAMLAD SYHMAADVMA LIVAFTCIKI 120
  121 ATRPSTRLGY GWVRAETLGG FFNGIFMCTV CVLVFQEAVG RIINVHMITH PLQVLVIGFI 180
  181 GLLINLFGMF NLSGHGHSHG GGSHGHSHGG SHGHSHNNKK TKKNDGHGHS HANGHGHSHD 240
  241 GKSDCNGEEE PDHTRLNGKF RSASAMANSD ANVRLLDNDD NSNDIIERRL SGVNSQNTII 300
  301 ATVDRQMTPY GTHMASEVLN VSSNNLDKSA QKTEQKKDKN VNIHGVWLHL LSDAFGSVIV 360
  361 MISAGFVYFL PTWKIAAYLD PILSISLASI MGFTAVVLVK TSGEKLLKQT PEGLDLEKVK 420
  421 KDLCSIVGVS KVEKLSVWTL CGQRIIAAAH VNICHPAVFP EAAYKIKNYF HDLGVHSTTI 480
  481 EPTFEDTCMQ SMRIMVKKVV DGKSIEEPVS VSTENEITE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] FFAS03 5.25 No description for 2qfiA was found.
    2 View Details [210..519] PSI-BLAST 40.39794 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  0.750157541821141 bayes_pls_golite062009
  • binding
    		•  0.573250496054441 bayes_pls_golite062009
    2
    Term Confidence Notes
  • protein binding
    		•  0.743159456460354 bayes_pls_golite062009
  • binding
    		•  0.562757473446686 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle