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Protein Overview: idi-1

General Information:
Name(s) found: idi-1 / CE26944 [WormBase]
Description(s) found:
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  • WBGene00019460 locus:idi-1 status:Confirmed UniProt:G5EFQ1 protein_id:CCD64456.1 [WormBase]
  • gi|47013849|gb|AAT08468.1| isopentenyl-diphosphate isomerase [Caenorhabditis elegans] [NCBI NR]
  • gi|17554092|ref|NP_498766.1| Isopentenyl Diphosphate Isomerase family member (idi-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|13324991|gb|AAK18968.1| Isopentenyl diphosphate isomerase protein 1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE26944 WBGene00019460 locus:idi-1 status:Confirmed TR:Q9BI81 protein_id:AAK18968.1 [wormpep150.fasta]
  • 26944 WBGene00019460 locus:idi-1 status:Confirmed TR:Q9BI81 protein_id:AAK18968.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • isopentenyl-diphosphate delta-isomerase (3J183) [Caenorhabditis elegans]gi|13324991|gb|AAK18968.1| Isopentenyl diphosphate isomerase protein 1 [Caenorhabditis elegans]gi|47013849|gb|AAT08468.1| isopentenyl-diphosphate isomerase [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9BI81 protein_id:AAK18968.1 [wormpep115.fasta.reversed]
  • CE26944 status:Partially_confirmed TR:Q9BI81 protein_id:AAK18968.1 [wormpep80.hongbin]
  • CE26944 WBGene00019460 locus:idi-1 status:Confirmed UniProt:Q9BI81_CAEEL protein_id:AAK18968.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE26944 WBGene00019460 locus:idi-1 status:Confirmed UniProt:Q9BI81_CAEEL protein_id:AAK18968.1| [wormORF-contam.fasta]
  • Isopentenyl Diphosphate Isomerase family member (idi-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • isopentenyl-diphosphate isomerase [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Isopentenyl diphosphate isomerase protein 1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE26944 WBGene00019460 locus:idi-1 status:Confirmed UniProt:Q9BI81 protein_id:AAK18968.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE26944 WBGene00019460 locus:idi-1 status:Confirmed UniProt:G5EFQ1 protein_id:CCD64456.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isopentenyl Diphosphate Isomerase OS=Caenorhabditis elegans GN=idi-1 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 236 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: isoprenoid biosynthetic process [IEALink to PubMed article]
    Molecular Function: isopentenyl-diphosphate delta-isomerase activity [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPSLRGLSQ IGMARRAVEL SSYDAQQVEY MREQCINVDE NDRIIGGVSK REAHSSYQLV  60
   61 LHRAFSVFSF TSDNKLLMQK RSAEKITFPN LWTNTCCSHP LHTQQEMDGV PGAKRAAIRK 120
  121 LEHELGITGV SLNKFQMAGK YIYRAEMNNA PWGEHELDYA LILRGIGAEN CNINENEVAE 180
  181 VREVVLDELK LWMRKEPNSF TPWLKLFSQT ETFEKWWTIN KNTEESIEDT NIYKLH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..236] PSI-BLAST 44.69897 No description for 2icjA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle