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Protein Overview: CE26941

General Information:
Name(s) found: CE26941 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00019457 locus:vms-1 Protein vms-1 status:Confirmed UniProt:P34511 protein_id:CCD64453.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 618 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFTLKSLEF LQGVEPFRID ENHENEGASE EEEVLISAET DAGMSLMLEW KMRLSEDSDQ  60
   61 CTTCNCPVDF GDRAVLLEHY QSLFHRTNTL RKARNMTVYT EEDFEGIENS ENDLTSSQTT 120
  121 IGLESDDEEF DALLLPANRS FFIKNGSVFS VPRNILHVGE RDVSSVTFLR PFDCAIFLWN 180
  181 GGHFAAAMFE NDKMTVQKSF HRYVARAKQG GVQSQHDSGG KGAAKSAGAQ LRRYNEQKMK 240
  241 EEIQSIMSSW KSRLQKTPLL FIRCAAYHRN IFFEADAGIE TRDDRIRTIP FETKRPNIDE 300
  301 ISDCWQRLQQ VSEHGAESDF RAEMLEVREK RKKLARKVAG KKRKDGGMQM ICEWSDDDEN 360
  361 EDISKEKKTH HIKVRTIKKP EETVVQWPRL DDEWRQKTYN YVRQDSVEAL KEHLASLNED 420
  421 VTSEANDYLR NAKIPPNRST FLHVSAANDA RKCLKYFLEE VNCDSSTKDG AGLPPYSSSA 480
  481 NSDVKSIFID YRVKNETAGN WARTHIPEPK KKVELTEEQE REQAERKKEK KARQKEKEKL 540
  541 KKEIAKRDVE EMEERQKYVN MSEREKRALA VDRRLAGLPP ILRCHQCGVQ LPPTPFQYSH 600
  601 YNFCSTSCVA EHRKANPQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] FFAS03 1.32 Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa
    2 View Details [161..296] deduced N/A No confident structure predictions are available.
    3 View Details [297..618] PSI-BLAST 41.045757 Ankyrin-R

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.304205134456748 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle