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Protein Overview: CE26840

General Information:
Name(s) found: CE26840 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00022373 locus:mrpl-15 status:Confirmed UniProt:Q9BPN6 protein_id:CCD70789.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 298 amino acids

    Gene Ontology:
    Cellular Component: large ribosomal subunit [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of embryonic development [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQAARSAKE RALQIVEQAS RIRIQDARDN IGARTTGRQL KKGHNQMGHT QGALERAAKP  60
   61 PLGWIWGDFF RPWQRMYPGE KLFNADINTR REYIPLSLVE LARLIDLGWI NPRQPIDIST 120
  121 LCTTQKFQIN PKMRQYGFDL TEEGADSFPY SIDIEVQYAT PSAIAAVEKA GGRVRTAYYD 180
  181 VESLEAAINP KCWFEAGKVV PKRKQPPQSL LEYYMDAKNR GYLCEEQEIE KERALSAQIR 240
  241 GYTLPPPPSS AALKAVDQVF HGIPSGSVVS LADRKVFVTK NELHREYYSS RRADKLYS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] PSI-BLAST 31.39794 70S ribosome functional complex
    2 View Details [180..298] MSA 1.044963 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.4893803036544 bayes_pls_golite062009
  • structural molecule activity
    		•  8.91740015840503 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle