YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: npp-13

General Information:
Name(s) found: npp-13 / CE26832 [WormBase]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • WBGene00003799 locus:npp-13 status:Partially_confirmed UniProt:Q9BKT9 protein_id:CCD73434.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 787 amino acids

    Gene Ontology:
    Cellular Component: nuclear pore [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQFTEILGR VDHQGFAQLL ANPIFQTNRV GQENSQQFTV RNGVEQELCG ILGGSEGDWT  60
   61 RQTHSVQKQM MFGERGIELP SRQPKSHTAE DTLTDEGVVD VPEAVMDDID EEELDEDISR 120
  121 VKVETDRAFF NHMLLSRPAA VPMNPAQAME RDNLPFGGGK FVNKNISDRR ELIFGDKLHK 180
  181 FLKNQGKKSL VDLMKEAIDE SGTDGALGDV WNDVTSVLNR KTSASRDDLT TTANLVEDAC 240
  241 KYLQAVFTEH MQTVVERNLE VAERGGIPGT RGLVNAFLKV GTEESFQPED DSIDGMPTWQ 300
  301 VTYHCVRAGD MKSASETLNR LKSFPQCATL VAALNHVAKH GKLDSELKKK LKVEWRHNLA 360
  361 HTKDKYKRAL YAALLGGLDS AALADTLENW IWFKLYPLHV DPQLTDVLFK EVQKAVSVDY 420
  421 GEQYFMSNGP SEFQYFFTAL WLSGQFERAI YLLHECGQRV DSVHVAVLAH KLGYLRMSKK 480
  481 STDEMLVVDQ NDSTKCHLNL ARLIVAYTKS FELVDVPRSL DYWFLLKGIT TPTGSDVFEM 540
  541 AVSRSVYLTG QTDEILGKLT PDGRREKGLI DEYLDDPSEV ICRVASDTEI TGEWDQAVGL 600
  601 YLLASKPTNA AILLSSEISE TLRTENKEKI ADLVHVAEQF KKVQRGCQAS EYATLSLLVD 660
  661 LAVLFDHCRN EEAEIAYGIS THLRLIPTEP DQVTVIVNEF HMVPQKVREV LPDMCLHLMK 720
  721 CLVDHCIRQS TTQANRGANS ATTSMFSSSN RYVKQIKAIV LYSATVPYKF PTHVTSRLLQ 780
  781 LQASLGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] MSA 2.037983 View MSA. No confident structure predictions are available.
    2 View Details [156..787] PSI-BLAST 172.0 No description for 2qx5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle