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Protein Overview: gly-20

General Information:
Name(s) found: gly-20 / CE26613 [WormBase]
Description(s) found:
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  • WBGene00001645 locus:gly-20 status:Confirmed UniProt:O17560 protein_id:CAB03823.2 [WormBase]
  • gi|17557542|ref|NP_505864.1| GLYcosylation related family member (gly-20) [Caenorhabditis elegans] [NCBI NR]
  • gi|13548344|emb|CAB03823.2| C. elegans protein C03E10.4, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE26613 WBGene00001645 locus:gly-20 UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II status:Confirmed TR:O17560 protein_id:CAB03823.2 [wormpep150.fasta]
  • 26613 WBGene00001645 locus:gly-20 UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II status:Confirmed TR:O17560 protein_id:CAB03823.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • UDP-GlcNAc:a-6-D-mannosideb1,2-N-acetylglucosaminyltransferase II (56.2 kD) (5L765) [Caenorhabditis elegans]gi|13548344|emb|CAB03823.2| Hypothetical protein C03E10.4 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:gly-20 UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II status:Confirmed TR:O17560 protein_id:CAB03823.2 [wormpep115.fasta.reversed]
  • CE26613 UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II status:Confirmed TR:O17560 protein_id:CAB03823.2 [wormpep80.hongbin]
  • CE26613 WBGene00001645 locus:gly-20 UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II status:Confirmed UniProt:O17560_CAEEL protein_id:CAB03823.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE26613 WBGene00001645 locus:gly-20 UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II status:Confirmed UniProt:O17560_CAEEL protein_id:CAB03823.2| [wormORF-contam.fasta]
  • Hypothetical protein C03E10.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • GLYcosylation related family member (gly-20) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE26613 WBGene00001645 locus:gly-20 UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II status:Confirmed UniProt:O17560 protein_id:CAB03823.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE26613 WBGene00001645 locus:gly-20 status:Confirmed UniProt:O17560 protein_id:CAB03823.2 [wormpep246-ecoli-contam.fasta]
  • GLYcosylation related OS=Caenorhabditis elegans GN=gly-20 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 487 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Golgi stack [IEALink to PubMed article]
    Biological Process: oligosaccharide biosynthetic process [IEALink to PubMed article]
    Molecular Function: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVYRRMHRL ANAVIACCLF GFIVIFLKAP GEDQRLRDGV PVLSQNPVWS VNDWNGLNKE  60
   61 VVDLLKNESN RLSINEKPDL SGWNFKTKED MSLKGSEIVE SVSFLNENFD ILNAAKFGDL 120
  121 STVKTILVIQ VHDRPVYLQY LIESMRNTKG IEDTLLVFSH DINVGIINEM IRNITFARVY 180
  181 QIFYPYNLQL FPTVFPGQSP SDCPEKMKRD KAQETNCSNW SSPDKYGNYR VAQLTQIKHH 240
  241 WWWKMNFVFD GIVEKYSMKD PWVLLLEEDH MLAPDALHVL DIIVSNRPKY CENCEIISLG 300
  301 FYLKSTNKYG QDIAHLGVHP WYSSKHNMGM ALQKNTWQKI KGCSEMFCKW DDYNWDWSLM 360
  361 QISAKCLPQR FRVIFTKSPR VIHIGDCGVH THRCEAHKAL QSTQELFRQH KDLLFPTSLS 420
  421 VTDTSRRSLK PSKENGGWGD IRDRQLCEIN KSPLVRVSSQ SASVLHKLLN SKIQFSSSNK 480
  481 TITSTTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] MSA 1.018994 View MSA. No confident structure predictions are available.
    2 View Details [120..487] FFAS03 1.09 N-acetylglucosaminyltransferase I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • mannosyltransferase activity
    		•  2.91704191906172 bayes_pls_golite062009
  • transferase activity
    		•  2.3313878748424 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  1.79134608260098 bayes_pls_golite062009
  • catalytic activity
    		•  1.73979371332125 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.72243473171787 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  1.29569087547477 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.539883035270389 bayes_pls_golite062009
  • alpha-1,2-mannosyltransferase activity
    		•  0.527277995036393 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.445622848132392 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  0.253749136504386 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle