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Protein Overview: CE25500

General Information:
Name(s) found: CE25500 [WormBase]
Description(s) found:
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  • WBGene00013256 status:Confirmed UniProt:Q9NA69 protein_id:CAB55016.2 [WormBase]
  • gi|6782292|emb|CAB55016.2| C. elegans protein Y57A10A.13, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17537593|ref|NP_496590.1| hypothetical protein Y57A10A.13 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE25500 WBGene00013256 status:Partially_confirmed TR:Q9NA69 protein_id:CAB55016.2 [wormpep150.fasta]
  • 25500 WBGene00013256 status:Partially_confirmed TR:Q9NA69 protein_id:CAB55016.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • streptococcus pyogenes AMV256 like (81.2 kD) (2M468) [Caenorhabditis elegans]gi|6782292|emb|CAB55016.2| Hypothetical protein Y57A10A.13 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9NA69 protein_id:CAB55016.2 [wormpep115.fasta.reversed]
  • CE25500 status:Partially_confirmed TR:Q9NA69 protein_id:CAB55016.2 [wormpep80.hongbin]
  • CE25500 WBGene00013256 status:Partially_confirmed UniProt:Q9NA69_CAEEL protein_id:CAB55016.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE25500 WBGene00013256 status:Partially_confirmed UniProt:Q9NA69_CAEEL protein_id:CAB55016.2| [wormORF-contam.fasta]
  • Hypothetical protein Y57A10A.13 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y57A10A.13 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE25500 WBGene00013256 status:Partially_confirmed UniProt:Q9NA69 protein_id:CAB55016.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE25500 WBGene00013256 status:Confirmed UniProt:Q9NA69 protein_id:CAB55016.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y57A10A.13 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 710 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    3'-5' exonuclease activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDFMSNTAA LQLLHNAVKS YEREVANFFA ANEKATSKYT GRFDFRQFAK KMFDPIPTAQ  60
   61 LGQLYIEMLE ESHIYMHSHQ KSRVGANGYP HSFVSVPELL LNMILAYQLP QQRFVPAEKM 120
  121 EEDGGKVEED GGAGGAGGSR KKRRNSAARK GKNVTINPRV VLGNELAAKL LEEMLKIPLA 180
  181 PESKQWKTAK YVLCPSSCPQ QMEVFGEIIA KNTKSGLISF NALNYFMHDP ILNRYLDDPI 240
  241 TILHALYIGP LQAPTVELFA TNRTDVFRQR CREVLRIALH ASKDPMTFTY SVPEFIDKNH 300
  301 PDRCSYRDFV ETVTQLIRDL NGEHQGSTAI HTGWACAAIK KFGQKRYVDK TWKDENYYDL 360
  361 IWTVLAQRPH LKKFVVDVLE KNFKDLDAAR FWRRMQPYQM NPTVIFNQNV IIVDPLQPTD 420
  421 EFLNFPPTVR HIQMVTNEKE IRDLQMLLEY KVSREEKIYV GVDAEWSAYV SPSKATILQM 480
  481 SLHDCIYIID LESYQISPQS YHHVLSYLFE TPEIVKIGFQ FGEDLHQLRA AFRNCVALYR 540
  541 PNNVVCVGKL IMDLMDEIGK LENCDDFRKE WLPHLTDNET SSAANSSVEE QANETIDTNE 600
  601 SMDEGDGGGS GIVVKKEESV KQQFLNKGLS FICEKLLGRP LDKTEQCSVW DRRPLRCLQL 660
  661 RYAAMDAYCM LLLYEKCATI FAKLGINVND FVSKQSPIRI SLPLLSEEKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] deduced N/A No confident structure predictions are available.
    2 View Details [158..358] MSA 1.030979 View MSA. No confident structure predictions are available.
    3 View Details [359..423] deduced N/A No confident structure predictions are available.
    4 View Details [424..710] PSI-BLAST 30.39794 No description for 2hbjA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle