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Protein Overview: bbs-1

General Information:
Name(s) found: bbs-1 / CE25181 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00000241 locus:bbs-1 status:Partially_confirmed UniProt:Q9NEZ7 protein_id:CAC48119.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 576 amino acids

    Gene Ontology:
    Cellular Component: cilium axoneme [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKPVNVNQS KWTVPVLLKE CEIYCPSTCV AFGPILSDND SKLIIAHGGH RGVNMKLKVF  60
   61 QQLEQLSESS LADMPTALVH FINDLSSIPS IAVAAGPSLL IYKNLKPFYK FTVPSSAINP 120
  121 TESEAWKAVV NKKINGDTLL TVLKRLEDDV AFSKLTPISQ TYLRADKETQ VVLVEHYGTK 180
  181 IANSATITCI AKLTKSTAEP LDILVIGTEH CEIFLIDSQA FTILETIKIG SVPVNICAYG 240
  241 TYDVDYRLFV QTRASLIFCM KRGEADYQPI VISQSMITSM VLVNKMIVYT TVENLIHFAS 300
  301 FRGKKMNTVK CPSKIKMLEP FIYPLKQLAA VIAVFDKEIR MYNEHYLLDT VQYEKPLAWV 360
  361 KYGCYGREDS TLVVAFKDGS IAIQIFRRKA NFDTKLDYNQ VPQAHALKLQ IPKKTKVFID 420
  421 LTQREVQLGN RIHKVYQKNL FDVKYRLAAS YLELTSSASA TVSTTTVLPV EISVDIHGFG 480
  481 PTFRMTIHLL SSSKQNLYDM HLSIISDPEL YDFDTPLIPV HLLASGQSYS FTTLLYCKDP 540
  541 EKAANCDVRA LLVHAKRATP IVTAVIKMPF SEFPLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] MSA 1.02099 View MSA. No confident structure predictions are available.
    2 View Details [115..262] deduced N/A No confident structure predictions are available.
    3 View Details [263..467] deduced N/A No confident structure predictions are available.
    4 View Details [468..576] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle