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Protein Overview: fox-1

General Information:
Name(s) found: fox-1 / CE25105 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00001484 locus:fox-1 Sex determination protein fox-1 status:Partially_confirmed UniProt:Q10572 protein_id:CCD67194.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: mating behavior [IMPLink to PubMed article]
    mRNA metabolic process [IMPLink to PubMed article]
    primary sex determination [IGILink to PubMed article]
    oviposition [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    single-stranded RNA binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQALYQLSAT GAQQQNQQIP IGLSNSLLYQ QLAAHQQIAA QQHQQQLAVS AAHQTQNNIM  60
   61 LATSAPSLIN HMENSTDGKV KDDPNSDYDL QLSIQQQLAA AAQAAQMGQT QIGPQIVGQQ 120
  121 GQPVVATTAG STNGSAAVTQ PDPSTSSGPD GPKRLHVSNI PFRFRDPDLK TMFEKFGVVS 180
  181 DVEIIFNERG SKGFGFVTME RPQDAERARQ ELHGSMIEGR KIEVNCATAR VHSKKVKPTG 240
  241 GILDQMNPLM AQSALAAQAQ MNRALLLRSP LVAQSLLGRG AALIPGMQQP AFQLQAALAG 300
  301 NPLAQLQGQP LLFNAAALQT NALQQSAFGM DPAAVQAALL ANEQARFQLA AAAAQGNEYI 360
  361 MYHQAKQQEL PGRIPSSGNA SAFGEQYLSN ALATASLPSY QMNPALRTLN RFTPY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 7.30103 solution structure of RNA binding domain in RNA binding motif protein 23
    2 View Details [129..229] PSI-BLAST 21.0 NMR Structure of the RNA Binding Domain of Human Fox-1 in Complex with UGCAUGU
    3 View Details [230..312] deduced N/A No confident structure predictions are available.
    4 View Details [313..415] PSI-BLAST 3.221849 poly(A) binding protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle