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Protein Overview: CE24996

General Information:
Name(s) found: CE24996 [WormBase]
Description(s) found:
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  • WBGene00018734 status:Confirmed UniProt:Q965M4 protein_id:CCD71456.1 [WormBase]
  • gi|17534265|ref|NP_493928.1| hypothetical protein F53A10.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|14625180|gb|AAK71368.1|AF016660_2 Hypothetical protein F53A10.2a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE24996 WBGene00018734 status:Confirmed TR:Q965M4 protein_id:AAK71368.1 [wormpep150.fasta]
  • 24996 WBGene00018734 status:Partially_confirmed TR:Q965M4 protein_id:AAK71368.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • Rap1GAP family member (83.9 kD) (2B519) [Caenorhabditis elegans]gi|14625180|gb|AAK71368.1| Hypothetical protein F53A10.2a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE24996 WBGene00018734 status:Partially_confirmed TR:Q965M4 protein_id:AAK71368.1 [wormpep132.fasta]
  • 24996 WBGene00018734 status:Confirmed TR:Q965M4 protein_id:AAK71368.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Partially_confirmed TR:Q965M4 protein_id:AAK71368.1 [wormpep115.fasta.reversed]
  • CE24996 status:Partially_confirmed TR:Q965M4 protein_id:AAK71368.1 [wormpep80.hongbin]
  • CE24996 WBGene00018734 status:Confirmed UniProt:Q965M4_CAEEL protein_id:AAK71368.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE24996 WBGene00018734 status:Confirmed UniProt:Q965M4_CAEEL protein_id:AAK71368.1| [wormORF-contam.fasta]
  • F53A10.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F53A10.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE24996 WBGene00018734 status:Confirmed UniProt:Q965M4 protein_id:AAK71368.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE24996 WBGene00018734 status:Confirmed UniProt:Q965M4 protein_id:CCD71456.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of H2L055, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F53A10.2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 742 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of small GTPase mediated signal transduction [IEALink to PubMed article]
    signal transduction [IEALink to PubMed article]
    Molecular Function: GTPase activator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWIYSWKDS IFYGMCSCSG SPSYHEKDVP HPHDRLDMPL QLKAYRRNSL NAEGYYRDLE  60
   61 RMHERGLFTT GINYNAEKSE DFLNMIERMQ SNRLDDQRCE MPERTHNPTS GHQNEQTHQK 120
  121 TNGSAVHNQL TRNIMNEVLT KVGPYPQIVL PSNGFWMDGV NQQHHMDDQV NNMNVNSCAR 180
  181 FKLETDETSH CYRRHFFGRE HHDFFANDPI VGPLVLSVRT EVISSCDHFR IILRTRKGTI 240
  241 HEIVSATALA DRPSASRMAK LLCEEITTEQ FSPVAFPGGS ELIVQYDEHV LTNTYKFGVI 300
  301 YQKGGQTTEE QLFGNPHGSP AFDEFLSMIG DSVQLNGFQK YRGGLDTAHN QTGHQSVFSE 360
  361 FKNREIMFHV STMLPYTIGD AQQLQRKRHI GNDIVAIIFQ EANTPFAPDM IASNFLHAYV 420
  421 VVQPIDALTD RVRYRVSVAA RDDVPFFGPT LPTPSIFKRG QDFRNFLLTK LINAENAAYK 480
  481 SSKFAKLAER TRSSLLDGLH ATLRERAEFY ATPLLESTSS GGESAATTSS SSNSYGGGIL 540
  541 SSVKKAFIGR SRSVSQEASH VPHRAATINV TSRPKKSISS TSSSTSARTH SPIRDEEVVK 600
  601 PYRKEWEISS QESPDNEHDS DTGMESMSST EMSGQTRASS CTFCVDDFHV AANHQSSDAK 660
  661 RLETLCVDVT RLQNEKHDLL RQNVSCKTDI KKLKDRQSVL SEELERANDE ISRLRRMLKK 720
  721 PSNSDMAPVH QHFERSYSDV SV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] MSA 1.046991 View MSA. No confident structure predictions are available.
    2 View Details [110..515] PSI-BLAST 129.0 Crystal Structure of the Rap1GAP catalytic domain
    3 View Details [516..629] MSA 3.058995 View MSA. No confident structure predictions are available.
    4 View Details [630..742] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle