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Protein Overview: lin-48

General Information:
Name(s) found: lin-48 / CE24940 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003033 locus:lin-48 status:Confirmed UniProt:G5EDU6 protein_id:CAA84317.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [TASLink to PubMed article]
    tail tip morphogenesis [IMPLink to PubMed article]
    hindgut morphogenesis [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    transcription factor activity [ISSLink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRVWLPLI GAHLLPRDIS VITQMIANNN NTSISRSSTN SSKPEEKNSK KFLIERFLDD  60
   61 DPSPPASILS PSPKAAIPSP IINPAVEFVN GGYGVKNPLA PLISSFETTS IPCSTVSPSS 120
  121 LISSSKDEFQ DSLTCHICGK KFGLQRLLNR HIKCHSDLKR YLCTFCGKGF NDTFDLKRHT 180
  181 RTHTGVRPYK CEQCEKSFTQ RCSLESHLRK VHGVTHQYAY KERRSKVFVC EDCGYTDEKF 240
  241 EVYLSHIKVV HPFSAAYLRF TQLQKKNSSM KPEQLSKISL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..205] PSI-BLAST 59.69897 No description for 2i13A was found.
    2 View Details [206..280] FFAS03 4.49 No description for 2i13A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle