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Protein Overview: CE24126

General Information:
Name(s) found: CE24126 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00022458 locus:prp-31 status:Confirmed UniProt:Q9N592 protein_id:CCD66198.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 504 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gastrulation with mouth forming first [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAEELMAD FDDDDDEDLE DIPDLGENLK GVKKEELDDD IEEATEEPMD TTKYASVHDV  60
   61 AKLARSDEYL ALVKQLEVEL KRPQDEVKVT APLEADPQYK LIVKLSHVAA DIDNEINVIH 120
  121 KFVRDKYEKR FPELETLVPN ALTYLATVQL LGNEINSKVV KEQLGGILDA STCMVVSVTV 180
  181 STTQGVKLEP NELETVMDAC NLAAQLHVNR LEMHQLVEWR MALIAPNLVA LLGSTTTAHL 240
  241 VSQAGGLSPL ATMPSCNVQV LGKTKKNLIG FSTVSTNPHH GFIYFHQLVQ KMPPDLKNKA 300
  301 AKILAAKVTL VARIDAQHES SNGEKGAEFL ALVESKFEKM LEPPPVKANK ALPKPLDKAS 360
  361 KKRGGRRTRK MKERLGMTDL RKSANRMNFG ELGEDVMQEH MGFDIGQVKT GNVTGGRIRT 420
  421 AAVDQKTRAR MSQKMMRQME RQKAAGGMTS IRSKMAGTAS SVTFTPIQGL EIINPAAQEQ 480
  481 QQCSSTSNYF SSSGSFVNID RMTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] deduced N/A No confident structure predictions are available.
    2 View Details [96..349] PSI-BLAST 87.0 No description for 2ozbB was found.
    3 View Details [350..504] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
    		• 7.49125847856109 bayes_pls_golite062009
  • RNA binding
    		•  3.2756923991225 bayes_pls_golite062009
  • binding
    		•  1.79978015066238 bayes_pls_golite062009
  • snoRNA binding
    		•  1.52707271561647 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.16675709303653 bayes_pls_golite062009
  • protein binding
    		•  0.493388535201982 bayes_pls_golite062009
  • catalytic activity
    		•  0.115416547010168 bayes_pls_golite062009
  • snoRNP binding
    		•  0.0745425288077295 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle