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Protein Overview: CE23958

General Information:
Name(s) found: CE23958 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00011631 status:Confirmed UniProt:Q94013 protein_id:CAB02307.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 566 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    establishment of mitotic spindle orientation [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSESVSEEQ SDYQWPWCLM GHFGIQFLET DNSESFVEGD LSRAYIKDYE LLKASKRPRE  60
   61 EKSPEKLLQE EMDEISLKEI DTEPNGEEKL LDERDTPYEV LPKWTCDKRK MKKKKEKGRY 120
  121 NYRSFEEYWD VSSYWLHQIT WLNDFGNQMT EENRNELTKQ CEVMKPIYPI DQHKDILENP 180
  181 DYQQITKTMI EKNPESTFED IYTKHCKLIK KQSENDFHDF QTKFVANRCK DMLSRIKRLG 240
  241 YAPGFEESQL PVFHSGAEQE IERPIIKDIR YTIDESYSKK FCGADPRDET SDEPSTSEES 300
  301 QSADVSSAVI SIKNPAEIRF NFDPETEQHL IASNAEKLYA NDPEISKYYY QRYRLFSRLD 360
  361 QGIIMDREGW FSVTPEAIAE HIADRVVRNN VSVVVDAFTG VGGNAIQFAL RGAHVIAIDM 420
  421 DPVRLKCARE NARVYGVENY IDFICADFFD VAATWQADKK LAPKVDAVFL SPPWGGPSYL 480
  481 KAKEFDLATG CCPNGIDIFD VSLKICPNIA YFLPRNTKVS QLVELATKAK SRMEIEQSAL 540
  541 NSKIKTITVY YGKLAYREEL SNSSKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..566] PSI-BLAST 61.522879 Crystal Structure of RumA, the iron-sulfur cluster containing E. coli 23S Ribosomal RNA 5-Methyluridine Methyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity
    		•  0.00950662522666201 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle