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Protein Overview: CE23726

General Information:
Name(s) found: CE23726 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00009658 status:Partially_confirmed UniProt:G5EBX5 protein_id:CAA90398.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: transcription [IEALink to PubMed article]
    RNA polyadenylation [IEALink to PubMed article]
    Molecular Function: nucleotidyltransferase activity [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]
    polynucleotide adenylyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSVNTLSVN ITVPITRTFG VSQPISTALP NAKDLELTSS LQKTLNQYNS YEPQEETSQR  60
   61 VKVLQKLNGC VKQWIQKITE ARYPKDQLFN AGGQLMAFGS YRLGVHSSGA DIDTLVLAPR 120
  121 HATRADFFSS FKQMLAKDPE VTNLCAVENA FVPIMTMKYS GIEIDFLFAR LALKEVPEDL 180
  181 DILDDALLKN LDQESVRSLN GCRVAENLLK LVPNQENFCI TLRAIKLWAK NHGIYSNSMG 240
  241 FFGGITWAIL VARACQLYPN ASPSKLIQKV FFIFSTWKWP APVLLDFISS DRMDLAQLNQ 300
  301 LVWDPRRNQS DRYHLMPIVT PAFPQQNSTH NVSRSSMKVI QEEMKDALIT CDNIQNGSCN 360
  361 WMDLLEEINF FSRYKHFISL SMTAETEKDE LAFGGFFESR IRQLVLILEK NQGIKLAHIN 420
  421 PKKFKAAKDP KKSVWFIGLQ FDENVKNLDL TKDIQQFKRN IDYQAKSVKD IEANCAVETD 480
  481 FSYVKRSDLA QTISVKDLKQ GKMYKKPESK DPVSKKRKVS ENAPSVPKKQ KLDVSEKSSV 540
  541 ESLLKNLKKK SLIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..554] PSI-BLAST 142.0 Crystal structure of poly(A) polymerase in complex with 3'-dATP and magnesium chloride

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.122769147009 bayes_pls_golite062009
  • RNA binding
    		•  1.07207584601969 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.92178707322923 bayes_pls_golite062009
  • polynucleotide adenylyltransferase activity
    		•  0.911825870004661 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.667889614569279 bayes_pls_golite062009
  • transferase activity
    		•  0.63270331673446 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle