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Protein Overview: zyx-1

General Information:
Name(s) found: zyx-1 / CE23716 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00006999 locus:zyx-1 status:Confirmed UniProt:Q9U3F4 protein_id:CAB03095.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 603 amino acids

    Gene Ontology:
    Cellular Component: focal adhesion [ISSLink to PubMed article]
    actin cytoskeleton [ISSLink to PubMed article]
    Biological Process: reproduction [IMPLink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article][ISSLink to PubMed article]
    protein binding [ISSLink to PubMed article]
    DEAD/H-box RNA helicase binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPPPPPPPP PLLPSGEILP SRKWKTEDAP RRNNHPAPAP PKPSRPTVDA SALQHAAARL  60
   61 RKTGYNEPVR GDVENLSDGR LDRPHQQLPD GDRTYRANLQ QLAQPKTRAE IPSPPTYSNQ 120
  121 PRPLGDFHRD PNALSQFQQS REALLSSTSP TSNYSPINKF SSSTLTQYAN KSPSPPSFGN 180
  181 SNSEATYVSP YSSKHSYPTN FRSYHKDDDY FNNTATTATT TTSSNSLNEN NNSNKYGNKE 240
  241 TVLQWSEPYD PSKIRRSQSP IRNAREMIHE YSTTNYVTEV QQPPPPPPDL YQRMTQARTF 300
  301 LQNSLAKQLR DEGLTESQKA ANRNQTGALS ASSSIPFDAS QIVKNSYNGD EVDHLVHQMR 360
  361 TKLNQPADTS PSIVQYPRRQ APDSSRANYS ATTSTSFSSS TTRKIMNINI CVGCGKEITG 420
  421 DQPGCNAMNQ IFHVDCFKCG QCSKTLAGAS FYNIDDKPTC EGCYQNSLEK CTACNRAISD 480
  481 KLLRACGGVY HVNCFVCFSC KKSLDGIPFT LDKDNNVHCV PCFHDKFAPR CALCSKPIVP 540
  541 QDGEKESVRV VAMDKSFHVD CYKCEDCGMQ LSSKLEGQGC YPIDNHLLCK TCNGNRLRVV 600
  601 SST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] MSA 2.160994 View MSA. No confident structure predictions are available.
    2 View Details [179..347] deduced N/A No confident structure predictions are available.
    3 View Details [348..603] PSI-BLAST 42.0 No description for 2i13A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle