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Protein Overview: dmd-4

General Information:
Name(s) found: dmd-4 / CE23560 [WormBase]
Description(s) found:
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  • WBGene00007776 locus:dmd-4 status:Partially_confirmed UniProt:Q18248 protein_id:CAA93739.2 [WormBase]
  • pir||T19516 hypothetical protein C27C12.6 - Caenorhabditis elegans [NCBI NR]
  • gi|5824393|emb|CAA93739.2| C. elegans protein C27C12.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17550670|ref|NP_510466.1| DM (Doublesex/MAB-3) Domain family member (dmd-4) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE23560 WBGene00007776 locus:dmd-4 doublesex protein like status:Partially_confirmed TR:Q18248 protein_id:CAA93739.2 [wormpep150.fasta]
  • 23560 WBGene00007776 doublesex protein like status:Partially_confirmed TR:Q18248 protein_id:CAA93739.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • transcription factor (XP476) [Caenorhabditis elegans]gi|5824393|emb|CAA93739.2| Hypothetical protein C27C12.6 [Caenorhabditis elegans]gi|7496592|pir||T19516 hypothetical protein C27C12.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • CE23560 WBGene00007776 doublesex protein like status:Partially_confirmed TR:Q18248 protein_id:CAA93739.2 [wormpep132.fasta]
  • 23560 WBGene00007776 locus:dmd-4 doublesex protein like status:Partially_confirmed TR:Q18248 protein_id:CAA93739.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • doublesex protein like status:Partially_confirmed TR:Q18248 protein_id:CAA93739.2 [wormpep115.fasta.reversed]
  • CE23560 doublesex protein like status:Partially_confirmed TR:Q18248 protein_id:CAA93739.2 [wormpep80.hongbin]
  • CE23560 WBGene00007776 locus:dmd-4 doublesex protein like status:Partially_confirmed UniProt:Q18248_CAEEL protein_id:CAA93739.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE23560 WBGene00007776 locus:dmd-4 doublesex protein like status:Partially_confirmed UniProt:Q18248_CAEEL protein_id:CAA93739.2| [wormORF-contam.fasta]
  • DM (Doublesex/MAB-3) Domain family member (dmd-4) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C27C12.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE23560 WBGene00007776 locus:dmd-4 doublesex protein like status:Partially_confirmed UniProt:Q18248 protein_id:CAA93739.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE23560 WBGene00007776 locus:dmd-4 status:Partially_confirmed UniProt:Q18248 protein_id:CAA93739.2 [wormpep246-ecoli-contam.fasta]
  • DM (Doublesex/MAB-3) Domain family OS=Caenorhabditis elegans GN=dmd-4 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 260 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: sex differentiation [IEALink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]
    transcription factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMIGNLHVFP NGRIERERKP KCARCRNHGL VSWLKGHKRH CKYKECACEK CNLIAERQRV  60
   61 MAAQVALKRR QATEDAIALG LRVVAGQAID RLPQGPVWNT AGGEDEDMDY LDEEIEEKPP 120
  121 TPVSEELVPL KRKKVEETYE LSSFSPIELL MTLFCEHEKH VLELVLEACH GNVLQAIEHF 180
  181 ANVRRVKNIN QMKLFAAATR MDHVFPNMTN FILPKQSFLI DSLLEQPTFP VSSQASTSTK 240
  241 TCDSSSVDSI SPNSSTFESS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 18.221849 DM domain of Doublesex (dsx)
    2 View Details [87..260] FFAS03 1.23 No description for 2dhyA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle