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Protein Overview: fat-1

General Information:
Name(s) found: fat-1 / CE22790 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00001393 locus:fat-1 Omega-3 fatty acid desaturase fat-1 status:Confirmed UniProt:Q9NEQ0 protein_id:CAC44309.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 402 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carotene metabolic process [IEALink to PubMed article]
    fatty acid biosynthetic process [IEALink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [IEALink to PubMed article]
    oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAHSSEGLS ATAPVTGGDV LVDARASLEE KEAPRDVNAN TKQATTEEPR IQLPTVDAFR  60
   61 RAIPAHCFER DLVKSIRYLV QDFAALTILY FALPAFEYFG LFGYLVWNIF MGVFGFALFV 120
  121 VGHDCLHGSF SDNQNLNDFI GHIAFSPLFS PYFPWQKSHK LHHAFTNHID KDHGHVWIQD 180
  181 KDWEAMPSWK RWFNPIPFSG WLKWFPVYTL FGFCDGSHFW PYSSLFVRNS ERVQCVISGI 240
  241 CCCVCAYIAL TIAGSYSNWF WYYWVPLSFF GLMLVIVTYL QHVDDVAEVY EADEWSFVRG 300
  301 QTQTIDRYYG LGLDTTMHHI TDGHVAHHFF NKIPHYHLIE ATEGVKKVLE PLSDTQYGYK 360
  361 SQVNYDFFAR FLWFNYKLDY LVHKTAGIMQ FRTTLEEKAK AK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..177] MSA 8.750996 View MSA. No confident structure predictions are available.
    2 View Details [178..402] MSA 5.754995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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