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Protein Overview: CE22786

General Information:
Name(s) found: CE22786 [WormBase]
Description(s) found:
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  • WBGene00022060 locus:dmd-9 status:Confirmed UniProt:Q95XU1 protein_id:CCD73137.1 [WormBase]
  • gi|17543946|ref|NP_500305.1| hypothetical protein Y67D8A.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|14574435|gb|AAK68545.1|AC024848_3 Hypothetical protein Y67D8A.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE22786 WBGene00022060 status:Partially_confirmed TR:Q95XU1 protein_id:AAK68545.1 [wormpep150.fasta]
  • 22786 WBGene00022060 status:Predicted TR:Q95XU1 protein_id:AAK68545.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • DMY protein like family member (4E16) [Caenorhabditis elegans]gi|14574435|gb|AAK68545.1| Hypothetical protein Y67D8A.3 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • 22786 WBGene00022060 status:Partially_confirmed TR:Q95XU1 protein_id:AAK68545.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Predicted TR:Q95XU1 protein_id:AAK68545.1 [wormpep115.fasta.reversed]
  • CE22786 status:Predicted TR:Q95XU1 protein_id:AAK68545.1 [wormpep80.hongbin]
  • CE22786 WBGene00022060 status:Partially_confirmed UniProt:Q95XU1_CAEEL protein_id:AAK68545.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE22786 WBGene00022060 status:Partially_confirmed UniProt:Q95XU1_CAEEL protein_id:AAK68545.1| [wormORF-contam.fasta]
  • Y67D8A.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y67D8A.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE22786 WBGene00022060 status:Confirmed UniProt:Q95XU1 protein_id:AAK68545.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE22786 WBGene00022060 locus:dmd-9 status:Confirmed UniProt:Q95XU1 protein_id:CCD73137.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • DM (Doublesex/MAB-3) Domain family OS=Caenorhabditis elegans GN=dmd-9 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 254 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: sex differentiation [IEALink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]
    transcription factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVFVPVQTT AEIVLVDVTA AQKKAMKKLT CRKCEGHGTY AILKGHAGVC PYKDCSCGTC  60
   61 ASVMSMRANA LIRRFRHRQP DQSMAVVKAL RSKNGNMRLR IVPRNDEETV VENDGTLVTY 120
  121 SSDKNGHQTY TTTTRRSSIM TNSTDDRDSV VSTPPSTTNN STPSGSPPLL VPYGDVDIAV 180
  181 DPVGAANWEQ ITNIVRTTML NQILMNPTNV SPALISFLLQ PTQQPSFEPS TMSLAPPVLF 240
  241 PTFLNGLSVP SLSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] FFAS03 3.05 DM domain of Doublesex (dsx)
    2 View Details [149..254] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle