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Protein Overview: CE22605

General Information:
Name(s) found: CE22605 [WormBase]
Description(s) found:
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  • WBGene00013249 status:Predicted UniProt:Q9NA88 protein_id:CAB55009.1 [WormBase]
  • pir||T31626 hypothetical protein Y57A10A.d - Caenorhabditis elegans [NCBI NR]
  • gi|5832921|emb|CAB55009.1| Hypothetical protein Y57A10A.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|17537579|ref|NP_496584.1| hypothetical protein Y57A10A.4 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE22605 WBGene00013249 status:Predicted TR:Q9NA88 protein_id:CAB55009.1 [wormpep150.fasta]
  • 22605 WBGene00013249 status:Predicted TR:Q9NA88 protein_id:CAB55009.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • SPK containing protein family member (2M443) [Caenorhabditis elegans]gi|5832921|emb|CAB55009.1| Hypothetical protein Y57A10A.4 [Caenorhabditis elegans]gi|7510226|pir||T31626 hypothetical protein Y57A10A.d - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q9NA88 protein_id:CAB55009.1 [wormpep115.fasta.reversed]
  • CE22605 status:Predicted TR:Q9NA88 protein_id:CAB55009.1 [wormpep80.hongbin]
  • CE22605 WBGene00013249 status:Predicted UniProt:Q9NA88_CAEEL protein_id:CAB55009.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE22605 WBGene00013249 status:Predicted UniProt:Q9NA88_CAEEL protein_id:CAB55009.1| [wormORF-contam.fasta]
  • Y57A10A.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y57A10A.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE22605 WBGene00013249 status:Predicted UniProt:Q9NA88 protein_id:CAB55009.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 629 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFIHTSLTR LMRFAVDQTK DIIEPLMVTK VLTEFSESEN DGLSHYAHYA KFHNYLVPNM  60
   61 AKLAEYSIEE RVRVIFGFAA VVSDDFLKQI QREGLVHLDK KKRICKFTSH NGKWKLEGDH 120
  121 SHSARMKRRW SMRVRVVVGL PSLMNFLVEK TKDIIEPMLA SAAFREFSES EDGGLPEHAY 180
  181 YNHFHKNVAP NMAKIEEYSI EERVRVMFAL AGRVSADFRA QTKGLVELDD GKRISKFTST 240
  241 DGKLKLEGDH SDSARRKRSA AFYRKTDHHC RSANDSKPRR KNGRQSDSEF SDKSGSDEDD 300
  301 VESAISYGNS PKRARCEKSA DPEMHVSSGS DDDEVEDVGG MDEEPVLLPI DSDESHIGHL 360
  361 QNGEEMMVED DNQPIPEDPQ YSANSSHQGR RMSGRIQEKL SASIAQETTD AAVAIPHVPI 420
  421 LNPPFESDDE EVKYIGAVKG QPKPGPIESV FDQINNRDHF QGNQEYRNQS ISERKVDVPL 480
  481 FVEHQQISLS AENRATSAEW KSIFLHDFLK QLTQFICFFE CSELAEIKRN IKEVMADEGK 540
  541 ISSFQKLEII DIRTVLGAFF FGVSRKIKST GSNNSTMKAK DFLVTFKYFL LGLDFSELLE 600
  601 LSTVFKRKLT SSHVQRHPPS SPKPTLHNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] Pfam 64.376751 No description for PF04435.9 was found. No confident structure predictions are available.
    2 View Details [135..305] Pfam 60.508638 No description for PF04435.9 was found. No confident structure predictions are available.
    3 View Details [306..560] deduced N/A No confident structure predictions are available.
    4 View Details [561..629] MSA 3.032993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle