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Protein Overview: dcap-1

General Information:
Name(s) found: dcap-1 / CE22543 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00021929 locus:dcap-1 status:Confirmed UniProt:Q9N363 protein_id:CCD74070.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 332 amino acids

    Gene Ontology:
    Cellular Component: cytoplasmic mRNA processing body [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAKKKAAA ELAAKNLAQL QKIDIAASKI LDKMPFAAIY HIDAARKEWN QSNCEGTFFV  60
   61 YQRADRPYFS FLIANRNDPS DFIEPLTLNH ILRHDGNFIY FYKDLASIQA LWFHQIDDAQ 120
  121 KIYNLLQKLV NRLKGSTTEQ ARAAKAASEA PQASVPAPTQ APAAPAQAPQ MAPQAPPKVD 180
  181 LLQLIKSAQN PPQKSAATIE QMPPMLQKLM LKEPGAAMSA DELEKDLIKS AKPHRNHLLQ 240
  241 EFTNSTSAIS LAAVSTKPLH GSEGDVESDI AEGEILEPLD ASFVVGSGEQ TPVLNKEQFI 300
  301 SAIAHLMQTD DEFVSQIHQA YVSALNRRLN ID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] PSI-BLAST 15.045757 Crystal structure of Dcp1p
    2 View Details [78..137] FFAS03 2.9 Crystal structure of Dcp1p
    3 View Details [138..332] MSA 7.140997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle