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Protein Overview: CE22538

General Information:
Name(s) found: CE22538 [WormBase]
Description(s) found:
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  • WBGene00021944 status:Partially_confirmed UniProt:Q9N349 protein_id:CCD67294.1 [WormBase]
  • gi|7324121|gb|AAF59603.1| Hypothetical protein Y55F3BR.7 [Caenorhabditis elegans] [NCBI NR]
  • gi|17543694|ref|NP_499999.1| hypothetical protein Y55F3BR.7 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE22538 WBGene00021944 status:Predicted TR:Q9N349 protein_id:AAF59603.1 [wormpep150.fasta]
  • 22538 WBGene00021944 status:Predicted TR:Q9N349 protein_id:AAF59603.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein (4B590) [Caenorhabditis elegans]gi|7324121|gb|AAF59603.1| Hypothetical protein Y55F3BR.7 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q9N349 protein_id:AAF59603.1 [wormpep115.fasta.reversed]
  • CE22538 status:Predicted TR:Q9N349 protein_id:AAF59603.1 [wormpep80.hongbin]
  • CE22538 WBGene00021944 status:Predicted UniProt:Q9N349_CAEEL protein_id:AAF59603.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE22538 WBGene00021944 status:Predicted UniProt:Q9N349_CAEEL protein_id:AAF59603.1| [wormORF-contam.fasta]
  • Hypothetical protein Y55F3BR.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y55F3BR.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE22538 WBGene00021944 status:Predicted UniProt:Q9N349 protein_id:AAF59603.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE22538 WBGene00021944 status:Partially_confirmed UniProt:Q9N349 protein_id:CCD67294.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 211 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTYSYTRV TTRSNGLPSK SPIEELPVYS PIYSSTFRTA VGSSSNSINT AGLDGLRTPM  60
   61 RSSGDDSGKT MKTSITTDKK ISDQNTLFFF QNFPIFSGIF YWNPTQPADE PYAYASSTGT 120
  121 TCCESRRAVL NGTKWSTKRS KFLKRRNNNT AWRTNNSLFD TFFLAFFLKI GTNYIFLRVF 180
  181 TQNPKNSSEN WKIYHFSQFS LKNWPDDQFL P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle