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Protein Overview: CE22238

General Information:
Name(s) found: CE22238 [WormBase]
Description(s) found:
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  • WBGene00013042 locus:cccp-1 status:Partially_confirmed UniProt:Q9XTT2 protein_id:CAB11567.1 [WormBase]
  • pir||T27055 hypothetical protein Y49E10.23 - Caenorhabditis elegans [NCBI NR]
  • gi|3980007|emb|CAB11567.1| C. elegans protein Y49E10.23a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17556076|ref|NP_499628.1| hypothetical protein Y49E10.23 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE22238 WBGene00013042 status:Partially_confirmed TR:Q9XTT2 protein_id:CAB11567.1 [wormpep150.fasta]
  • 22238 WBGene00013042 status:Partially_confirmed TR:Q9XTT2 protein_id:CAB11567.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein, with 6 coiled coil domains, of fungal and metazoan origin (84.7 kD) (3N573) [Caenorhabditis elegans]gi|3980007|emb|CAB11567.1| Hypothetical protein Y49E10.23a [Caenorhabditis elegans]gi|7510044|pir||T27055 hypothetical protein Y49E10.2 [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9XTT2 protein_id:CAB11567.1 [wormpep115.fasta.reversed]
  • CE22238 status:Partially_confirmed TR:Q9XTT2 protein_id:CAB11567.1 [wormpep80.hongbin]
  • CE22238 WBGene00013042 status:Partially_confirmed UniProt:Q9XTT2_CAEEL protein_id:CAB11567.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE22238 WBGene00013042 status:Partially_confirmed UniProt:Q9XTT2_CAEEL protein_id:CAB11567.1| [wormORF-contam.fasta]
  • Y49E10.23a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y49E10.23a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE22238 WBGene00013042 status:Partially_confirmed UniProt:Q9XTT2 protein_id:CAB11567.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE22238 WBGene00013042 locus:cccp-1 status:Partially_confirmed UniProt:Q9XTT2 protein_id:CAB11567.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE22238 WBGene00013042 locus:cccp-1 status:Confirmed UniProt:Q9XTT2 protein_id:CAB11567.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q8I0Z1, Conserved Coiled-Coil Protein OS=Caenorhabditis elegans GN=cccp-1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 734 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of apoptosis [IEALink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDVVESCE ATPTNSTYGT PVRVASPLIH NEDDVIPTTA VENSLYSKCN AVQEQEFERL  60
   61 ESQNAEYREK LLRTIRERDL NEELLKNVQN QHKKELDAQV RRIRELEVQL KTTTDRGLAQ 120
  121 EAHFNVTTKE MSQKFNLALQ QATKKAEQCD KEKNEAVVKY AMREGEMMKL RDEISKKDSN 180
  181 MKVIKEELEA ARKAQSQENL DDLEKTVQNL KVEIEKLKHE RFDFENRMKI AEKRVESLSS 240
  241 NLSESKQQGD MLRKQLIQAK DDKHIIQQYE VKLQTSTAEL ERRLRESEHD VERLRTSQLE 300
  301 MATKFEEASR ENTDLLSKID ILQDQLSLEE DRRKLCEEQI DRLKGVESFV ESSSHRIEET 360
  361 EKERETAEED REQAELEAAE YREQVEKMLK LTQELTERNM ELQRKLKDEE GKNTSHNSTI 420
  421 EKLQVELTTS LELCKSFEET NLKISEELEN LKTEMQKPVT LESLEENFYR DKYDEASRKL 480
  481 EQTEAKLAEE KNNFSAFKKK TSATLKELKS ELSGYRKNNG AGDSGAALGA HVLAPPTSSD 540
  541 PSMSSRSRAS SITSIDRVTS TSREEEVSSA AGEEAKRIEN EEQKLNMQQI MIDKIVILQR 600
  601 KLARRTEKCE FLEEHVRQCL EELQKKTKII QHFALREEAS LLMPSEGSLE KVPIGRKSAA 660
  661 YALMGAMFTS SGNEKKQVQI MTEVNSRLQA VLEDVIQKNI LMRSSVDTLS ADNTRLSREN 720
  721 RLLSLSQVRT TQDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 16.221849 Heavy meromyosin subfragment
    2 View Details [327..471] PSI-BLAST 10.39794 Tropomyosin
    3 View Details [472..734] PSI-BLAST 4.221849 No description for 2dfsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle