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Protein Overview: CE21874

General Information:
Name(s) found: CE21874 [WormBase]
Description(s) found:
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  • WBGene00012787 status:Predicted UniProt:Q9NF30 protein_id:CAB60342.1 [WormBase]
  • gi|6425271|emb|CAB60342.1| Hypothetical protein Y43D4A.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17543402|ref|NP_502983.1| hypothetical protein Y43D4A.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE21874 WBGene00012787 status:Predicted TR:Q9NF30 protein_id:CAB60342.1 [wormpep150.fasta]
  • 21874 WBGene00012787 status:Predicted TR:Q9NF30 protein_id:CAB60342.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • glycine transporter (4R689) [Caenorhabditis elegans]gi|6425271|emb|CAB60342.1| Hypothetical protein Y43D4A.1 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q9NF30 protein_id:CAB60342.1 [wormpep115.fasta.reversed]
  • CE21874 status:Predicted TR:Q9NF30 protein_id:CAB60342.1 [wormpep80.hongbin]
  • CE21874 WBGene00012787 status:Predicted UniProt:Q9NF30_CAEEL protein_id:CAB60342.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE21874 WBGene00012787 status:Predicted UniProt:Q9NF30_CAEEL protein_id:CAB60342.1| [wormORF-contam.fasta]
  • Y43D4A.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y43D4A.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE21874 WBGene00012787 status:Predicted UniProt:Q9NF30 protein_id:CAB60342.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 102 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: neurotransmitter transport [IEALink to PubMed article]
    Molecular Function: neurotransmitter:sodium symporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSPTQRRSP SDSSAAEDQR IATTIVRDSG SSKEIEESQA DPCRGAWGNQ IEFLLSTLGM  60
   61 AVGLGNIWRF PTRAYNNGGC LQPALLEVRF KVTKMSEKCG PQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] PSI-BLAST 14.0 Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle