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Protein Overview: stn-1

General Information:
Name(s) found: stn-1 / CE20737 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00006062 locus:stn-1 Syntrophin-1 status:Partially_confirmed UniProt:Q93646 protein_id:CAB03028.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of locomotion [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVRSGLVD IFVQGQWHRV LATLDPTAIT LQTMEQNEAE AEKRTVRVVK YDGNGLGISI  60
   61 KGGRDNNMPI VISKIFKGMA ADQAGELFLD DVIISVNGEN LLDASHEEAV RALKRAGRVV 120
  121 DLQVQYRRED MMHRENIVEN VEWDDDIRER VRTIGLKLAY VARAGIDADA EGRILEMRSP 180
  181 SGRYSLAMRC SSSEEADGWF EALHACTTCL LTQALAQVNI MLGNNPQVRH MGWIAEQVSE 240
  241 NGISMWKPKF MTLTNSEILF YEAVPQLKAE WAEPRLVRPL VATRVVQTSS RTAPVIKGLT 300
  301 DVISFRMRTG TQQGVRTHTI RVETHAELAR WVRAVVIGGY EACLSTSQVS APCLWRGESC 360
  361 ELIVNLDNGI SLLSSTGEVL WQHSFETIRA TGDDGGRFLW VDFGPPHGEQ VKMDFILTLI 420
  421 SYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] PSI-BLAST 30.30103 solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin
    2 View Details [144..423] PSI-BLAST 25.69897 Psd-95; Guanylate kinase-like domain of Psd-95


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle