YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE20611

General Information:
Name(s) found: CE20611 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00016918 status:Confirmed UniProt:O44466 protein_id:CCD68035.1 [WormBase]
  • gi|71985489|ref|NP_001023098.1| hypothetical protein C54E4.2 [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_500169.1| calcium-binding EF-hand and Thyroglobulin type-1 precursor (25.8 kD) (4C909) [Caenorhabditis elegans] [NCBI NR]
  • gi|13559580|gb|AAK29794.1| Hypothetical protein C54E4.2a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE20611 WBGene00016918 status:Confirmed TR:O44466 protein_id:AAK29794.1 [wormpep150.fasta]
  • 20611 WBGene00016918 status:Confirmed TR:O44466 protein_id:AAK29794.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • calcium-binding EF-hand and Thyroglobulin type-1 precursor (25.8 kD) (4C909) [Caenorhabditis elegans]gi|13559580|gb|AAK29794.1| Hypothetical protein C54E4.2a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:O44466 protein_id:AAK29794.1 [wormpep115.fasta.reversed]
  • CE20611 status:Confirmed TR:O44466 protein_id:AAK29794.1 [wormpep80.hongbin]
  • CE20611 WBGene00016918 status:Confirmed UniProt:O44466_CAEEL protein_id:AAK29794.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE20611 WBGene00016918 status:Confirmed UniProt:O44466_CAEEL protein_id:AAK29794.1| [wormORF-contam.fasta]
  • Hypothetical protein C54E4.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C54E4.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • hypothetical protein C54E4.2 [Caenorhabditis elegans] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • CE20611 WBGene00016918 status:Confirmed UniProt:O44466 protein_id:AAK29794.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE20611 WBGene00016918 status:Confirmed UniProt:O44466 protein_id:CCD68035.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE20611 WBGene00016918 locus:test-1 status:Confirmed UniProt:O44466 protein_id:CCD68035.1 [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Isoform of H2KZF8, Vertebrate proteoglycan TESTican homolog OS=Caenorhabditis elegans GN=test-1 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 226 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: calcium ion binding [IEALink to PubMed article]
    insulin-like growth factor binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIVAILAC HVAISAAYIS SEDLEKPSSA DKPVHEKNHC TRSELMRMGG RLVKWFKDVH  60
   61 AQESGADHTL KLHSVPCRVE VGWMFNQWDG NQDGKLSKAE LRPIERGGNE ACVEEFIDMC 120
  121 DDMVVDGSIS VDEWCDCFTF SDDLRHEPPC HKAKHDVDPH LLGVFLPRCD LEGFYKPEQC 180
  181 HDGNCWCVDR YGREFDKSRV QNTLPDCGQY ASDMTEEDIA FLRERL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] PSI-BLAST 21.221849 STRUCTURE OF A NOVEL EXTRACELLULAR CA2+-BINDING MODULE IN BM-40(SLASH)SPARC(SLASH)OSTEONECTIN
    2 View Details [138..226] PSI-BLAST 13.045757 No description for 2h7tA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.482343911625985 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle