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Protein Overview: lin-8

General Information:
Name(s) found: lin-8 / CE20455 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00002997 locus:lin-8 status:Confirmed UniProt:G5EDW7 protein_id:CCD61967.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of vulval development [IGILink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIKTHSTG SKRTVPFYKL PPPVPLPPLP PPDPTRYFST EKYIALSKDE KFKFDDYDVN  60
   61 DETLKKVVLN EIGKCPDIWS SRSQAAIMEH YPIVATETYR RTGLLLSIKS LKQIYKCGKD 120
  121 NLRNRLRVAI VSKRLTPAQV EAYMWRWEFY GFIRYYRDYT QRWEADLLKD LDVVLGLEAR 180
  181 RASKNMEKVD SGELMEPMEP MDSTMDEMCV EEEPYEETGS NWSDPAPEPS QSKSQSPEAK 240
  241 YPQAYLLPEA DEVYNPDDFY QEEHESASNA MYRIAFSQQY GGGGSPAVQK PVTFSAQPAP 300
  301 APVREAPSPV VENVSSSSFT PKPPAMINNF GEEMNQITYQ AIRIAREQPE RLKLLRKALF 360
  361 DVVLAFDQKE YADVGDLYRD LAQKNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] MSA 2.054957 View MSA. No confident structure predictions are available.
    2 View Details [184..386] MSA 34.115997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle