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Protein Overview: CE20335

General Information:
Name(s) found: CE20335 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00013405 locus:tdpt-1 5'-tyrosyl-DNA phosphodiesterase status:Confirmed UniProt:Q9XWG3 protein_id:CAA21707.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 362 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: DNA repair [IEALink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]
    inositol or phosphatidylinositol phosphatase activity [IEALink to PubMed article]
    endonuclease activity [IEALink to PubMed article]
    nuclease activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSDDEIQE IEAKRQKMSQ EDSEVEIEIL DEPEQGKLKN SSMSDEQKLH EFAIITATDE  60
   61 AFAQSILQDV DWDLKKALDV FYGSEAFAEA RSAAVMGASS SMASSGAAVM TAEDLKGFEV 120
  121 SVMSWNIDGL DGRSLLTRMK AVAHIVKNVN PDILFLQEVV DRDLAPIDKL QSLYKIYYSN 180
  181 KGCQYYTAIL VSKMFDVEKH DVIHFQNSGM YRTLQILEGS IGGLKVFLLN THLESTREHR 240
  241 PQRCAQFGFC MDKVREIIAQ NPGALVFFGG DLNLRDEEVS RVPDGVKDAW EAAGSDNKTK 300
  301 FTWDTFKNDN KQGFHGAKMR FDRLYWSGPL DKVKFTLEGR QRIRSCLCFP SDHWAINATF 360
  361 FA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..362] PSI-BLAST 28.221849 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle