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Protein Overview: CE20308

General Information:
Name(s) found: CE20308 [WormBase]
Description(s) found:
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  • WBGene00013194 status:Confirmed UniProt:Q9XWI4 protein_id:CAA21683.1 [WormBase]
  • pir||T27150 hypothetical protein Y54E2A.9 - Caenorhabditis elegans [NCBI NR]
  • gi|3881105|emb|CAA21683.1| C. elegans protein Y54E2A.9, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17537525|ref|NP_497065.1| hypothetical protein Y54E2A.9 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE20308 WBGene00013194 status:Partially_confirmed TR:Q9XWI4 protein_id:CAA21683.1 [wormpep150.fasta]
  • 20308 WBGene00013194 status:Partially_confirmed TR:Q9XWI4 protein_id:CAA21683.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • outer layer protein precursor family member (2P68) [Caenorhabditis elegans]gi|3881105|emb|CAA21683.1| Hypothetical protein Y54E2A.9 [Caenorhabditis elegans]gi|7510183|pir||T27150 hypothetical protein Y54E2A.9 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9XWI4 protein_id:CAA21683.1 [wormpep115.fasta.reversed]
  • CE20308 status:Predicted TR:Q9XWI4 protein_id:CAA21683.1 [wormpep80.hongbin]
  • CE20308 WBGene00013194 status:Partially_confirmed UniProt:Q9XWI4_CAEEL protein_id:CAA21683.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE20308 WBGene00013194 status:Partially_confirmed UniProt:Q9XWI4_CAEEL protein_id:CAA21683.1| [wormORF-contam.fasta]
  • Y54E2A.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y54E2A.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE20308 WBGene00013194 status:Confirmed UniProt:Q9XWI4 protein_id:CAA21683.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y54E2A.9 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: vitelline membrane formation [IEALink to PubMed article]
    Molecular Function: structural constituent of vitelline membrane [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSIAILAS LLLAISAEPT ILQSPRVTNW GEWTGKRCPS GQFVRGLRVK YDNAQYFSDQ  60
   61 TGINAIELVC HNRSDQVDTY LKSGEGPHGD WLELQYCPEG EYGVGFAIRS AGPLRGRFDD 120
  121 YGVVNFQLYC GQPNGKRNSW HRLTGVTFLN YQKGEWSSNQ YCQSGKVVCG INTQIETDQG 180
  181 WFGDDTGLNN ADLWCCDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] PSI-BLAST 40.0 Vitelline membrane outer protein-I (VMO-I)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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