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Protein Overview: CE20259

General Information:
Name(s) found: CE20259 [WormBase]
Description(s) found:
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  • WBGene00012855 Branched-chain-amino-acid aminotransferase status:Partially_confirmed UniProt:Q9XXD8 protein_id:CAA19519.1 [WormBase]
  • pir||T26898 hypothetical protein Y44A6D.5 - Caenorhabditis elegans [NCBI NR]
  • gi|3880951|emb|CAA19519.1| C. elegans protein Y44A6D.5, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17565728|ref|NP_508014.1| hypothetical protein Y44A6D.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE20259 WBGene00012855 Aminotransferase class IV status:Partially_confirmed TR:Q9XXD8 protein_id:CAA19519.1 [wormpep150.fasta]
  • 20259 WBGene00012855 Aminotransferase class IV status:Partially_confirmed TR:Q9XXD8 protein_id:CAA19519.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • branched chain aminotransferase (44.7 kD) (5V272) [Caenorhabditis elegans]gi|3880951|emb|CAA19519.1| Hypothetical protein Y44A6D.5 [Caenorhabditis elegans]gi|7509843|pir||T26898 hypothetical protein Y44A6D.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • Aminotransferase class IV status:Partially_confirmed TR:Q9XXD8 protein_id:CAA19519.1 [wormpep115.fasta.reversed]
  • CE20259 Aminotransferase class IV status:Predicted TR:Q9XXD8 protein_id:CAA19519.1 [wormpep80.hongbin]
  • CE20259 WBGene00012855 Aminotransferase class IV status:Partially_confirmed UniProt:Q9XXD8_CAEEL protein_id:CAA19519.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE20259 WBGene00012855 Aminotransferase class IV status:Partially_confirmed UniProt:Q9XXD8_CAEEL protein_id:CAA19519.1| [wormORF-contam.fasta]
  • Hypothetical protein Y44A6D.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y44A6D.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE20259 WBGene00012855 Aminotransferase class IV status:Partially_confirmed UniProt:Q9XXD8 protein_id:CAA19519.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE20259 WBGene00012855 status:Partially_confirmed UniProt:Q9XXD8 protein_id:CAA19519.1 Branched-chain-amino-acid aminotransferase [wormpep246-ecoli-contam.fasta]
  • Branched-chain-amino-acid aminotransferase OS=Caenorhabditis elegans GN=CELE_Y44A6D.5 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 393 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEALink to PubMed article]
    branched chain family amino acid metabolic process [IEALink to PubMed article]
    Molecular Function: catalytic activity [IEALink to PubMed article]
    transaminase activity [IEALink to PubMed article]
    branched-chain-amino-acid transaminase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKISSGLLK RSFISSSLRC THSFQYANLV VEKSTKKQRI PSDPAKLGFG RYFSDHMIDI  60
   61 DWDVKEGWIA PKICPFQNFS IHPAAKVLHY AIEIFEGMKA YHGVDGKIRL FRPELNMERM 120
  121 RRSARRSSLP DFDARQACLL IDELIRIDAD IVPKTDQASL YIRPMMFATE QHIGVSESTQ 180
  181 AKWACFTSIT GSYFNYEKGI RLLADPEMVR SWKGGVGQYK MGCNYAPTIF VGKMAALHGC 240
  241 DQAMWLSGDN RLITEAGAMN VFMLWTNEDN ELELITPPTD SGLLLPGITR QSIVELAQEM 300
  301 NLMKVSEKNF TMAQLSRAVH EKRVHEFFVS GTAANVGPVS EIVYCDKELD VMENLQIPTL 360
  361 SSKMQLHTRL NKTLSDIHFG RIEKKEWQHI VEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..393] PSI-BLAST 92.0 No description for 2hg8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle