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Protein Overview: arx-5

General Information:
Name(s) found: arx-5 / CE20206 [WormBase]
Description(s) found:
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  • WBGene00000203 locus:arx-5 Probable actin-related protein 2\/3 complex subunit 3 status:Confirmed UniProt:Q9XWV3 protein_id:CAA21538.1 [WormBase]
  • pir||T26637 hypothetical protein Y37D8A.1 - Caenorhabditis elegans [NCBI NR]
  • gi|3925210|emb|CAA21538.1| C. elegans protein Y37D8A.1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17555640|ref|NP_499667.1| ARp2/3 compleX component family member (arx-5) [Caenorhabditis elegans] [NCBI NR]
  • gi|10719885|sp|Q9XWV3.1|ARPC3_CAEEL RecName: Full=Probable actin-related protein 2/3 complex subunit 3; AltName: Full=Arp2/3 complex 21 kDa subunit; Short=p21-ARC [NCBI NR]
  • Probable actin-related protein 2/3 complex subunit 3 OS=Caenorhabditis elegans GN=arx-5 PE=3 SV=1 [Swiss-Prot]
  • (Q9XWV3) Probable ARP2/3 complex 21 kDa subunit (p21-ARC) [Swiss-Prot]
  • [wormpep67.fasta]
  • CE20206 WBGene00000203 locus:arx-5 status:Confirmed SW:Q9XWV3 protein_id:CAA21538.1 [wormpep150.fasta]
  • 20206 WBGene00000203 locus:arx-5 status:Confirmed SW:Q9XWV3 protein_id:CAA21538.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • actin Related protein 2/3 compleX component ARX-5, 3 complex Arp2 (arx-5) [Caenorhabditis elegans]gi|3925210|emb|CAA21538.1| Hypothetical protein Y37D8A.1 [Caenorhabditis elegans]gi|7509556|pir||T26637 hypothetical protein Y37D8A.1 - Caenorhabditis eleg [nrdb_11152004_Chlamydomonas]
  • locus:arx-5 status:Partially_confirmed SW:Q9XWV3 protein_id:CAA21538.1 [wormpep115.fasta.reversed]
  • CE20206 status:Confirmed SW:Q9XWV3 protein_id:CAA21538.1 [wormpep80.hongbin]
  • CE20206 WBGene00000203 locus:arx-5 status:Confirmed UniProt:Q9XWV3 protein_id:CAA21538.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE20206 WBGene00000203 locus:arx-5 status:Confirmed UniProt:Q9XWV3 protein_id:CAA21538.1| [wormORF-contam.fasta]
  • ARp2/3 compleX component family member (arx-5) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Probable actin-related protein 2/3 complex subunit 3 (ARP2/3 complex 21 kDa subunit) (p21-ARC) [nr-271106-contam.fasta]
  • Hypothetical protein Y37D8A.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE20206 WBGene00000203 locus:arx-5 status:Confirmed UniProt:Q9XWV3 protein_id:CAA21538.1 Probable actin-related protein 2\/3 complex subunit 3 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 183 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    Biological Process: regulation of actin filament polymerization [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAYHSKFDT ELKVLPLGNT NMGKLPIRTN FKGPAPQTNQ DDIIDEALTY FKPNIFFREF  60
   61 EIKGPADRTM IYLIFYITEC LRKLQKSPNK IAGQKDLHAL ALSHLLPIPG ENGFPLNSMY 120
  121 KAPQSKPDED EMRAYLQQIR QEIGARLCDL AFPDPQDRPS KWWLCFARRR FMDKGLVGQG 180
  181 VNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] PSI-BLAST 88.30103 Arp2/3 complex 21 kDa subunit ARPC3

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  5.63989846641024 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  4.21664682046338 bayes_pls_golite062009
  • actin filament binding
    		•  3.53574857524507 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  2.90019731783322 bayes_pls_golite062009
  • binding
    		•  1.94576284584165 bayes_pls_golite062009
  • protein binding
    		•  0.756249220099259 bayes_pls_golite062009
  • structural molecule activity
    		•  0.662672430262145 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle