YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: nkcc-1

General Information:
Name(s) found: nkcc-1 / CE19087 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00012543 locus:nkcc-1 status:Partially_confirmed UniProt:G5EFN5 protein_id:CAA16318.1 [WormBase]
  • pir||T22489 hypothetical protein Y37A1C.1b - Caenorhabditis elegans [NCBI NR]
  • gi|3880767|emb|CAA16318.1| C. elegans protein Y37A1C.1b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|3877430|emb|CAB05203.1| C. elegans protein Y37A1C.1b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17543068|ref|NP_502705.1| Na-K-Cl Cotransporter homolog family member (nkcc-1) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE19087 WBGene00012543 status:Partially_confirmed TR:Q9XTC4 protein_id:CAA16318.1 [wormpep150.fasta]
  • 19087 WBGene00012543 status:Partially_confirmed TR:Q9XTC4 protein_id:CAA16318.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein (4O872) [Caenorhabditis elegans]gi|3877430|emb|CAB05203.1| Hypothetical protein Y37A1C.1b [Caenorhabditis elegans]gi|3880767|emb|CAA16318.1| Hypothetical protein Y37A1C.1b [Caenorhabditis elegans]gi|7509555|pir||T22489 hypothet [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9XTC4 protein_id:CAA16318.1 [wormpep115.fasta.reversed]
  • CE19087 status:Partially_confirmed TR:Q9XTC4 protein_id:CAA16318.1 [wormpep80.hongbin]
  • CE19087 WBGene00012543 locus:nkcc-1 status:Partially_confirmed UniProt:Q9XTC4_CAEEL protein_id:CAB05203.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE19087 WBGene00012543 locus:nkcc-1 status:Partially_confirmed UniProt:Q9XTC4_CAEEL protein_id:CAB05203.1| [wormORF-contam.fasta]
  • Y37A1C.1b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y37A1C.1b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE19087 WBGene00012543 locus:nkcc-1 status:Partially_confirmed TR:Q9XTC4 protein_id:CAA16318.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE19087 WBGene00012543 locus:nkcc-1 status:Partially_confirmed UniProt:Q9XTC4 protein_id:CAB05203.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE19087 WBGene00012543 locus:nkcc-1 status:Partially_confirmed UniProt:G5EFN5 protein_id:CAA16318.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of H8ESD5, Na-K-Cl Cotransporter homolog OS=Caenorhabditis elegans GN=nkcc-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 262 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    chloride transport [IEALink to PubMed article]
    Molecular Function: cation:chloride symporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGNGENGTD EKQKLLSVVG VVSEEVVEMN RVSSARFQVS KTDEDEKTSD DNLRKLKSGS  60
   61 EPPPPTQNHE AVTLVTRKMS ATGRFMVTSD TNPGQLVAEV ADELGIDVPI DPPAEKSPAS 120
  121 RAKGVHFSVG DKDSGSMSED GDEKRNITHE NQTTFNMKSW RNMKTIEHPP IIDFYRNSID 180
  181 TDGVFNRPSM AQLIHGKEHK EQDLGFEELN KKPETAQLAK VIGLNLLSKE DQERRDFERK 240
  241 KRINQQKLQE MHKMHKETYN FR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle