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Protein Overview: CE19075

General Information:
Name(s) found: CE19075 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00012538 status:Confirmed UniProt:Q9XXF9 protein_id:CAA19490.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 471 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: selenium binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPNCGLKCH GGPGYASPAD AIKGPREEVL FVTAPNAADG PDAIFTVDVN PESDTFCQVI  60
   61 SRVDVPHIGD EVHHTGWNAC SSCHDKPTEK RSHLIVPCLN SDRIYIINVE NERKIYLEHT 120
  121 IEPSKLHSLN LSFPHTSHCL ADGNIMISTL GEANGTPSGN FLLLDGKTFE PKGTWPADEK 180
  181 TVPFNYDFWY QPRRNVMIST EWGSPNHIKK GFNPAHVGEG LYGNSVHIFE WDSKKYLQTI 240
  241 DLPQPLGALP LEVRFLHEPT SEHAFVGCAL GSGIFRIHPV EENSTTHAAT LVAFIPSKKV 300
  301 SGWALPEMPA LITDILISMD DRFLYVSCWL HGDIRQYDIS DPLKVKLNSQ VYIGGSVHTE 360
  361 SNVKVLEGEK PIEALYVKGR KIEGGPQMLQ LSLDGKRLYV TTSLYKKWDD QFYPEHVKSG 420
  421 ATMVQVNIDP ESGKMEINRD FLIDFGKIEG GPYLAHEMRY PGGDCTSDIW I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..64] MSA 2.053989 View MSA. No confident structure predictions are available.
    2 View Details [65..165] MSA 1.11698 View MSA. No confident structure predictions are available.
    3 View Details [166..231] PSI-BLAST 3.30103 3-carboxy-cis,cis-mucoante lactonizing enzyme
    4 View Details [232..471] PSI-BLAST 26.522879 Surface layer protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.565955069185473 bayes_pls_golite062009
  • protein binding
    		•  0.188092612225384 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle