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Protein Overview: rpb-11

General Information:
Name(s) found: rpb-11 / CE18986 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00012187 locus:rpb-11 Probable DNA-directed RNA polymerase II subunit RPB11 status:Confirmed UniProt:Q9XVH6 protein_id:CAB03455.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 122 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oocyte construction [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    transcription [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]
    DNA-directed RNA polymerase activity [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAPAAFESF LLLDDKKFYI EKDTKVPNAA IFTIMKEDHT LGNMLKIQLL KDPEVLFAGY  60
   61 KNPHPLEHKI LLRIQTTNNT TPADALTTAI TDLVGELSLL EHRIDAAIKK CTQSGDQERG 120
  121 YN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] PSI-BLAST 32.30103 RPB11


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle