YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE18673

General Information:
Name(s) found: CE18673 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00009542 locus:copb-2 Probable coatomer subunit beta' status:Partially_confirmed UniProt:Q20168 protein_id:CAA92776.1 [WormBase]
  • gi|7500807|pir||T21970 hypothetical protein F38E11.5 - Caenorhabditis elegans [NCBI NR]
  • gi|3876927|emb|CAA92776.1| C. elegans protein F38E11.5, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17540286|ref|NP_501671.1| hypothetical protein F38E11.5 [Caenorhabditis elegans] [NCBI NR]
  • Probable coatomer subunit beta' OS=Caenorhabditis elegans GN=copb-2 PE=3 SV=3 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE18673 WBGene00009542 beta'-coat protein like status:Partially_confirmed [wormpep150.fasta]
  • 18673 WBGene00009542 beta'-coat protein like status:Partially_confirmed [wormpep130-phg-ecoli-orf-rand.fasta]
  • g-protein beta WD-40 repeat and Coatomer WD associated region (111.1 kD) (4K227) [Caenorhabditis elegans]gi|3876927|emb|CAA92776.1| Hypothetical protein F38E11.5 [Caenorhabditis elegans]gi|7500807|pir||T21970 hypothetical protein F38E11.5 - Caenorhabdit [nrdb_11152004_Chlamydomonas]
  • beta'-coat protein like status:Partially_confirmed SW:Q20168 protein_id:CAA92776.1 [wormpep115.fasta.reversed]
  • CE18673 beta'-coat protein like status:Partially_confirmed SW:Q20168 protein_id:CAA92776.1 [wormpep80.hongbin]
  • CE18673 WBGene00009542 beta'-coat protein like status:Partially_confirmed UniProt:Q20168 protein_id:CAA92776.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE18673 WBGene00009542 beta'-coat protein like status:Partially_confirmed UniProt:Q20168 protein_id:CAA92776.1| [wormORF-contam.fasta]
  • Hypothetical protein F38E11.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • hypothetical protein F38E11.5 - Caenorhabditis elegans [nr-271106-contam.fasta]
  • F38E11.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE18673 WBGene00009542 locus:copb-2 status:Partially_confirmed UniProt:Q20168 protein_id:CAA92776.1 Probable coatomer subunit beta' [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 1000 amino acids

    Gene Ontology:
    Cellular Component: membrane coat [IEALink to PubMed article]
    Biological Process: vesicle-mediated transport [IEALink to PubMed article]
    protein complex assembly [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    intracellular protein transport [IEALink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    structural molecule activity [IEALink to PubMed article]
    protein transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRLDVKRK LLARSDRVKC VDLHPVETWL LAALYNGNVH IWNYETQTLV KSFEVCDVPV  60
   61 RAAKFVPRKS WVVTGSDDMH IRVFNYNTLE RVHQFEAHSD YLRSLVVHPT LPYVISSSDD 120
  121 MLVKMWDWDN KWAMKQSFEG HTHYVMQIAI NPKDNNTFAT ASLDKTVKVW QFGSNVPNFT 180
  181 LEGHEKGVNC VDYYHGGEKP YIISGADDHL VKIWDYQNKT CVQTLDGHAQ NVSSVCFHPE 240
  241 LPLIITGSED STVRLWHANT YRLETTLNYG LERVWCIQAQ KGANTIAIGY DEGSVTLKLG 300
  301 REEPAVSMDS SGKILWAKHS EIQQANLKTI STEESEAIQD GERLPLSVKD LGSSEIYPQT 360
  361 LAHSSNGRFV VACGDGEYIV YTAMALRNKD FGQGLEFVWA VDPNMFAVRE SATNVKIKKN 420
  421 FKDHKSIRSD MVLEGISGGP LLALRSNNSL CFFDWESAVL VRRIEITSKS IYWSDNGEMV 480
  481 AICGDDSFYV LKYSAEAVAN ATEVTEDGIE DAFEVIGEQA EAVKTGFWIG DCFIFTTALN 540
  541 RINYYVGGEI VTIAHVDRPL YLLGYMAKES RVYAVDKDLN VISYKLLLSV LEYQTAVMRR 600
  601 DFDTADKVLT TIPKEQRTRV AHFLEKQGFK KQALAVSQDP DHKFDLSVAL GDLKTAYDLA 660
  661 LQSDSEEKWK ALSNAATLKS ELLLAGECLG RARDFGGLML LATCAGSAPL LQKLADDSAA 720
  721 AESHNISFLS SLLLGDIDAC LDKLISTGRL PEAAFLARTH APSRVSSILE LWKAKASGHS 780
  781 EKSSRKIGES LADPVKYENL FPGFTQSLKA ESFVREISKI PVPASVRVPS AATRNIQEEL 840
  841 DEAVASGAVS FTDDGQAVLK NAPRQTETQL KAPPPPSVAR QPSPVRQPSP IREPSPIREP 900
  901 EPEEEEEQEE FDDDQQEVHV PANQESADAH GTSKTPDVVL ETSRPDIVPP RGSAAPDLVS 960
  961 ASSQQSAQDF QDDTQWSDED FGDAENGDLN MDDLNLDEED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle