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Protein Overview: puf-3

General Information:
Name(s) found: puf-3 / CE18393 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00004239 locus:puf-3 status:Confirmed UniProt:Q9U2G4 protein_id:CAB63369.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 502 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    pronuclear migration [IMPLink to PubMed article]
    cellular water homeostasis [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    Molecular Function: RNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQNTGSSNL GRYYESPPTA TEARGTFGGC FNANSSTNIW TPNRKVDSSM GFRSSSPTPQ  60
   61 SAWAPNRQGF GGQFSKWRTS TPMTTPARYP QQAVRLIDLE NNASFSKSLN STTRSHKCTL 120
  121 PIWAGDGEGN VSDSVTLQDV LANDALVEFA TDKNGCRFLQ EHYPTENDND VHQKLFRKLV 180
  181 EDRAIFLSLC SNMFGNFFVQ RVLECSNTEE QEILTEHLAT DLYNLCLDKS ACRVIQLAIQ 240
  241 KLDVHLATRL SLELRDTHLV RLSIDQNGNH VIQKIVKTLP VSSWTFLVDF FADDDNLIHV 300
  301 CQDKYGCRVI QSTVETLSTD QYAQCYQHRV ILLRSLMAGV TRNCTQLASN EFANYVVQHV 360
  361 IKCGDALAVY RDIIIEQCLL QNLLSMSQEK YASHVVEVAF ECAPYRLVAE MMNEIFEGYI 420
  421 PHPDTNRDAL DILLFHQYGN YVVQQMIQTC VLGQNARDQK QSEMYGMWLE KIHGRVMRNA 480
  481 HRLERFSSGK KIIEALQSMS LY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] deduced N/A No confident structure predictions are available.
    2 View Details [133..502] PSI-BLAST 104.0 Pumilio 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.72717267135753 bayes_pls_golite062009
  • protein transporter activity
    		•  1.12211290620813 bayes_pls_golite062009
  • protein binding
    		•  1.01840651819417 bayes_pls_golite062009
  • transporter activity
    		•  0.89694340608107 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.40908371617242 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle